Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.46□□□□□ -1.54
CISHQ9NSE2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CISHQ9NSE2 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CISHQ9NSE2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CISHQ9NSE2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CISHQ9NSE2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CISHQ9NSE2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CISHQ9NSE2 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CISHQ9NSE2 RN7SKP113-201ENST00000363891 295 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 RNU1-106P-201ENST00000384382 164 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 U3.32-201ENST00000408116 212 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 BX323845.1-201ENST00000432417 179 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 KNOP1P3-201ENST00000446933 426 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 AC090114.3-201ENST00000479267 829 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 AC093763.2-201ENST00000505334 1223 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 MIR3691-201ENST00000578066 90 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 LINC01739-205ENST00000641890 573 ntBASIC5.45□□□□□ -1.54
CISHQ9NSE2 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.45□□□□□ -1.54
CISHQ9NSE2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CISHQ9NSE2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CISHQ9NSE2 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CISHQ9NSE2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CISHQ9NSE2 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CISHQ9NSE2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CISHQ9NSE2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 SNURFL-201ENST00000309296 343 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 AL353625.1-202ENST00000366273 571 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 COX6CP13-201ENST00000428703 226 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC091180.1-201ENST00000462104 372 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 MYL12BP2-201ENST00000503948 512 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CISHQ9NSE2 OR10G5P-201ENST00000532733 358 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC006116.3-201ENST00000592968 361 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 OR7A8P-201ENST00000595427 913 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC092944.2-201ENST00000605443 889 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 AC112198.2-201ENST00000426589 6996 ntBASIC5.44□□□□□ -1.54
CISHQ9NSE2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
CISHQ9NSE2 ADAM5-202ENST00000399789 1942 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
CISHQ9NSE2 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.43□□□□□ -1.54
CISHQ9NSE2 RN7SKP16-201ENST00000410180 299 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.43□□□□□ -1.54
CISHQ9NSE2 DDX39BP1-205ENST00000422507 192 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.43□□□□□ -1.54
CISHQ9NSE2 RPL7AP61-201ENST00000443410 636 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 AC110749.1-201ENST00000462007 357 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.43□□□□□ -1.54
CISHQ9NSE2 RN7SKP260-201ENST00000516907 149 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 AC092490.3-201ENST00000545370 572 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 OR7E18P-201ENST00000592589 702 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 AC018695.5-201ENST00000605872 315 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 AL121612.2-201ENST00000612261 482 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms