Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 OR6E1P-201ENST00000414424 923 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 TNPO1P1-201ENST00000423641 1138 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 RNF19BPX-201ENST00000426224 625 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 MTCYBP29-201ENST00000436327 1006 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AC073109.1-201ENST00000445066 978 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 GAPDHP14-201ENST00000450472 937 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 HMGN1P9-201ENST00000515212 298 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 CDC42P3-201ENST00000518493 633 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AC078878.1-201ENST00000539832 958 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AC084759.1-201ENST00000561168 290 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 NDUFA5P11-201ENST00000567995 343 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AP000769.2-201ENST00000602344 396 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AL121890.2-201ENST00000617644 465 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 AC079298.1-201ENST00000625026 1619 ntBASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM5Q96HC4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AL078621.3-201ENST00000623707 2042 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC093849.1-201ENST00000563631 2209 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 Z93019.1-201ENST00000416450 973 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC244453.4-201ENST00000419150 388 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 SRSF1P1-201ENST00000424058 520 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC105399.1-202ENST00000447303 205 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC092754.1-201ENST00000472975 479 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 RPS12P31-201ENST00000491419 398 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC016559.2-201ENST00000510759 359 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 TMEM97P2-201ENST00000517841 403 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 IGHV3-63-201ENST00000518422 341 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 MIR1273E-201ENST00000581165 102 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 MTCO2P22-201ENST00000603246 681 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC023813.4-201ENST00000607580 580 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AL356274.1-201ENST00000617064 410 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC021106.3-201ENST00000623925 531 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 AC119674.1-220ENST00000641502 1048 ntBASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM5Q96HC4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM5Q96HC4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms