Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC079905.1-201ENST00000549280 475 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AL132857.1-201ENST00000555180 708 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC234772.3-201ENST00000602277 528 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC022022.2-201ENST00000602989 360 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 ELOCP35-201ENST00000604289 336 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AP002802.2-201ENST00000605877 235 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC006927.2-201ENST00000639256 389 ntBASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ATG4AQ8WYN0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 GTF2IP4-201ENST00000453092 2054 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 OR4F13P-202ENST00000560066 2054 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL356317.1-201ENST00000396110 1436 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC006600.2-201ENST00000624834 2506 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC144833.1-201ENST00000567953 4089 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC007068.1-201ENST00000396690 844 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 RNA5SP431-201ENST00000410312 120 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 HIGD1AP15-201ENST00000416198 280 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL160175.1-201ENST00000428124 247 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 PCBP2P1-201ENST00000437262 977 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL359265.1-201ENST00000440296 795 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 MTCYBP21-201ENST00000443300 1113 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL031313.1-201ENST00000448435 256 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 SNORD11.1-201ENST00000459482 85 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC068228.1-201ENST00000461723 211 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC020779.1-201ENST00000478757 796 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC092349.1-201ENST00000504903 310 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 ASNSP4-201ENST00000511103 447 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC074255.1-201ENST00000511259 501 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 OR5H7P-201ENST00000514084 930 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 RNA5SP438-201ENST00000516561 112 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 HMGN2P36-201ENST00000529541 409 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC084121.1-201ENST00000533882 835 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC023538.1-201ENST00000534576 736 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC122688.1-201ENST00000541494 223 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC087888.1-201ENST00000550884 1254 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC104229.1-201ENST00000561364 255 ntBASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.84□□□□□ -1.47
ATG4AQ8WYN0 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms