Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 snoU109.3-201ENST00000459477 145 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 RPL32P14-201ENST00000463196 378 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A1P61619 STRADBP1-201ENST00000478954 1281 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A1P61619 OR7E157P-201ENST00000494376 911 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.04□□□□□ -1.6
SEC61A1P61619 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A1P61619 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A1P61619 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A1P61619 AP001284.1-201ENST00000528393 2118 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SEC61A1P61619 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A1P61619 LRRC34P1-201ENST00000542742 915 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A1P61619 AC093014.1-201ENST00000548926 724 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AC126615.2-201ENST00000553003 515 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A1P61619 AC090888.2-201ENST00000559765 1144 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AC007346.2-201ENST00000564816 892 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AC106730.2-201ENST00000566641 540 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 AC005242.1-201ENST00000585658 438 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 AC069431.2-201ENST00000604149 1099 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A1P61619 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A1P61619 uc_338.26-201ENST00000612659 160 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AL645927.2-201ENST00000618350 349 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AC245014.3-201ENST00000618589 347 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 AC068057.2-201ENST00000624047 895 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AL357562.1-201ENST00000624911 609 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AC129915.3-201ENST00000634128 948 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 AP000550.3-201ENST00000637734 379 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 OR5AC4P-202ENST00000642086 985 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
SEC61A1P61619 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A1P61619 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A1P61619 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A1P61619 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A1P61619 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
SEC61A1P61619 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A1P61619 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A1P61619 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A1P61619 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A1P61619 AF287957.1-201ENST00000607368 1595 ntBASIC5.04□□□□□ -1.6
SEC61A1P61619 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 HSPA8P14-201ENST00000552265 1805 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 RNU105B-201ENST00000364478 208 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 SNRPEP6-201ENST00000407465 277 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 GPS2P1-201ENST00000411761 986 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 RPS15AP30-201ENST00000420976 390 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 GLUD1P9-201ENST00000420997 1173 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 RPL12P12-201ENST00000424633 501 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 RPS26P4-201ENST00000431743 355 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AC099063.2-201ENST00000446360 662 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AL445466.1-201ENST00000448432 357 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 AC016027.4-201ENST00000450866 277 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 CFL1P4-201ENST00000451536 498 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 CBX1P2-201ENST00000453841 458 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 FRG2FP-204ENST00000453982 852 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 RPL12P39-201ENST00000455456 496 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A1P61619 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A1P61619 RN7SL193P-201ENST00000491708 276 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 EIF3LP3-201ENST00000495197 822 ntBASIC5.03□□□□□ -1.6
SEC61A1P61619 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A1P61619 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A1P61619 OR56A7P-201ENST00000524865 941 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms