Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 FTLP19-201ENST00000433300 394 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXD4P09016 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXD4P09016 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXD4P09016 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXD4P09016 CBX1P2-201ENST00000453841 458 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXD4P09016 OR52A4P-203ENST00000498233 1014 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 ENPP7P11-201ENST00000505915 627 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXD4P09016 AC021146.10-201ENST00000515628 706 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD4P09016 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
HOXD4P09016 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXD4P09016 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXD4P09016 MIR3908-201ENST00000579798 126 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXD4P09016 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXD4P09016 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD4P09016 AC010615.3-201ENST00000597319 394 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 AL513327.3-201ENST00000602618 469 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 AL133481.2-203ENST00000607558 139 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 AC116651.1-201ENST00000609724 556 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 AL121612.2-201ENST00000612261 482 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 RPSAP73-201ENST00000614820 330 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
HOXD4P09016 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXD4P09016 AC074101.1-201ENST00000637861 241 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 AC239868.2-201ENST00000564237 4527 ntBASIC5.01□□□□□ -1.61
HOXD4P09016 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD4P09016 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD4P09016 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD4P09016 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD4P09016 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXD4P09016 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD4P09016 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXD4P09016 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5□□□□□ -1.61
HOXD4P09016 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5□□□□□ -1.61
HOXD4P09016 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5□□□□□ -1.61
HOXD4P09016 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 SOCS5P3-201ENST00000425115 1576 ntBASIC5□□□□□ -1.61
HOXD4P09016 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 AL158152.1-201ENST00000602652 1435 ntBASIC5□□□□□ -1.61
HOXD4P09016 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
HOXD4P09016 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5□□□□□ -1.61
HOXD4P09016 AL009179.1-201ENST00000406085 265 ntBASIC5□□□□□ -1.61
HOXD4P09016 RNA5SP296-201ENST00000410523 111 ntBASIC5□□□□□ -1.61
HOXD4P09016 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5□□□□□ -1.61
HOXD4P09016 RPS11P7-201ENST00000442125 465 ntBASIC5□□□□□ -1.61
HOXD4P09016 AC019185.1-201ENST00000442718 389 ntBASIC5□□□□□ -1.61
HOXD4P09016 AC012512.1-201ENST00000446594 718 ntBASIC5□□□□□ -1.61
HOXD4P09016 VDAC2P4-201ENST00000452925 711 ntBASIC5□□□□□ -1.61
HOXD4P09016 RSU1P1-201ENST00000453416 441 ntBASIC5□□□□□ -1.61
HOXD4P09016 AL645937.3-201ENST00000453647 936 ntBASIC5□□□□□ -1.61
HOXD4P09016 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5□□□□□ -1.61
HOXD4P09016 AC079841.1-201ENST00000481228 950 ntBASIC5□□□□□ -1.61
HOXD4P09016 ATP5LP5-201ENST00000483050 299 ntBASIC5□□□□□ -1.61
HOXD4P09016 MTND3P6-201ENST00000485242 339 ntBASIC5□□□□□ -1.61
HOXD4P09016 RPS21P4-201ENST00000487122 248 ntBASIC5□□□□□ -1.61
HOXD4P09016 AC004453.1-201ENST00000487895 408 ntBASIC5□□□□□ -1.61
HOXD4P09016 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5□□□□□ -1.61
HOXD4P09016 HMGN2P6-201ENST00000551091 273 ntBASIC5□□□□□ -1.61
HOXD4P09016 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5□□□□□ -1.61
HOXD4P09016 AL390726.5-202ENST00000564800 256 ntBASIC5□□□□□ -1.61
HOXD4P09016 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5□□□□□ -1.61
HOXD4P09016 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 AL713998.2-201ENST00000604538 1198 ntBASIC5□□□□□ -1.61
HOXD4P09016 AL133406.3-201ENST00000606817 541 ntBASIC5□□□□□ -1.61
HOXD4P09016 AC100814.1-201ENST00000606963 623 ntBASIC5□□□□□ -1.61
HOXD4P09016 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 AP003400.2-201ENST00000624036 666 ntBASIC5□□□□□ -1.61
HOXD4P09016 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5□□□□□ -1.61
HOXD4P09016 AC133552.1-201ENST00000569988 4007 ntBASIC5□□□□□ -1.61
HOXD4P09016 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HOXD4P09016 MFSD8-239ENST00000641590 2479 ntBASIC5□□□□□ -1.61
HOXD4P09016 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
HOXD4P09016 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5□□□□□ -1.61
HOXD4P09016 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5□□□□□ -1.61
HOXD4P09016 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5□□□□□ -1.61
HOXD4P09016 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 633.8 ms