Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC078899.1-201ENST00000521432 1185 ntBASIC5.87□□□□□ -1.47
RB1P06400 OR8G3P-201ENST00000533406 921 ntBASIC5.87□□□□□ -1.47
RB1P06400 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RB1P06400 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.87□□□□□ -1.47
RB1P06400 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.87□□□□□ -1.47
RB1P06400 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.87□□□□□ -1.47
RB1P06400 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.87□□□□□ -1.47
RB1P06400 AC012414.2-201ENST00000559474 187 ntBASIC5.87□□□□□ -1.47
RB1P06400 AC106730.2-201ENST00000566641 540 ntBASIC5.87□□□□□ -1.47
RB1P06400 RBM22P1-201ENST00000578589 1214 ntBASIC5.87□□□□□ -1.47
RB1P06400 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.87□□□□□ -1.47
RB1P06400 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.87□□□□□ -1.47
RB1P06400 AC073111.2-201ENST00000605657 1075 ntBASIC5.87□□□□□ -1.47
RB1P06400 AC010435.1-201ENST00000623353 1177 ntBASIC5.87□□□□□ -1.47
RB1P06400 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.87□□□□□ -1.47
RB1P06400 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
RB1P06400 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RB1P06400 AC097063.1-201ENST00000426714 1797 ntBASIC5.87□□□□□ -1.47
RB1P06400 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
RB1P06400 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RB1P06400 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RB1P06400 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RB1P06400 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RB1P06400 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
RB1P06400 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 OR55B1P-203ENST00000641518 2602 ntBASIC5.86□□□□□ -1.47
RB1P06400 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.86□□□□□ -1.47
RB1P06400 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.86□□□□□ -1.47
RB1P06400 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.86□□□□□ -1.47
RB1P06400 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RB1P06400 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 RNU4-4P-201ENST00000364588 130 ntBASIC5.86□□□□□ -1.47
RB1P06400 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 RNA5SP487-201ENST00000410186 122 ntBASIC5.86□□□□□ -1.47
RB1P06400 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.86□□□□□ -1.47
RB1P06400 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.86□□□□□ -1.47
RB1P06400 AC007161.1-204ENST00000423039 460 ntBASIC5.86□□□□□ -1.47
RB1P06400 AC017019.1-201ENST00000426129 261 ntBASIC5.86□□□□□ -1.47
RB1P06400 CRIP1P1-201ENST00000427567 185 ntBASIC5.86□□□□□ -1.47
RB1P06400 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 RPS3AP38-201ENST00000435889 763 ntBASIC5.86□□□□□ -1.47
RB1P06400 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 AC092647.3-201ENST00000443044 633 ntBASIC5.86□□□□□ -1.47
RB1P06400 AL672138.1-201ENST00000450604 1015 ntBASIC5.86□□□□□ -1.47
RB1P06400 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.86□□□□□ -1.47
RB1P06400 TAAR4P-201ENST00000454843 1039 ntBASIC5.86□□□□□ -1.47
RB1P06400 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.86□□□□□ -1.47
RB1P06400 RPS7P6-201ENST00000485777 579 ntBASIC5.86□□□□□ -1.47
RB1P06400 AC093890.1-201ENST00000502554 540 ntBASIC5.86□□□□□ -1.47
RB1P06400 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.86□□□□□ -1.47
RB1P06400 MTND2P7-201ENST00000521337 640 ntBASIC5.86□□□□□ -1.47
RB1P06400 BRD9P1-201ENST00000529855 560 ntBASIC5.86□□□□□ -1.47
RB1P06400 AC092490.3-201ENST00000545370 572 ntBASIC5.86□□□□□ -1.47
RB1P06400 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.86□□□□□ -1.47
RB1P06400 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.86□□□□□ -1.47
RB1P06400 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.86□□□□□ -1.47
RB1P06400 AC084036.1-201ENST00000609190 508 ntBASIC5.86□□□□□ -1.47
RB1P06400 AP005131.7-201ENST00000610087 611 ntBASIC5.86□□□□□ -1.47
RB1P06400 AL353662.3-201ENST00000625131 237 ntBASIC5.86□□□□□ -1.47
RB1P06400 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
RB1P06400 AC073869.7-201ENST00000640874 297 ntBASIC5.86□□□□□ -1.47
RB1P06400 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
RB1P06400 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
RB1P06400 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.86□□□□□ -1.47
RB1P06400 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 AC005224.3-201ENST00000584683 2140 ntBASIC5.86□□□□□ -1.47
RB1P06400 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RB1P06400 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RB1P06400 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RB1P06400 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
RB1P06400 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RB1P06400 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.85□□□□□ -1.47
RB1P06400 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RB1P06400 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RB1P06400 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.85□□□□□ -1.47
RB1P06400 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 AL589655.1-201ENST00000405398 482 ntBASIC5.85□□□□□ -1.47
RB1P06400 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RB1P06400 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.85□□□□□ -1.47
RB1P06400 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms