Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VTNP04004 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.71□□□□□ -1.5
VTNP04004 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.71□□□□□ -1.5
VTNP04004 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
VTNP04004 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.71□□□□□ -1.5
VTNP04004 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VTNP04004 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 RN7SKP103-201ENST00000363848 320 ntBASIC5.71□□□□□ -1.5
VTNP04004 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.71□□□□□ -1.5
VTNP04004 AC138761.5-201ENST00000433967 325 ntBASIC5.71□□□□□ -1.5
VTNP04004 AC099670.2-201ENST00000435130 321 ntBASIC5.71□□□□□ -1.5
VTNP04004 COX6B1P2-201ENST00000489624 230 ntBASIC5.71□□□□□ -1.5
VTNP04004 RPS23P1-201ENST00000491662 432 ntBASIC5.71□□□□□ -1.5
VTNP04004 AC006427.1-201ENST00000514359 712 ntBASIC5.71□□□□□ -1.5
VTNP04004 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.71□□□□□ -1.5
VTNP04004 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.71□□□□□ -1.5
VTNP04004 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.71□□□□□ -1.5
VTNP04004 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 MIR4691-201ENST00000583764 85 ntBASIC5.71□□□□□ -1.5
VTNP04004 AC011626.1-201ENST00000604710 562 ntBASIC5.71□□□□□ -1.5
VTNP04004 AC093388.1-201ENST00000609166 430 ntBASIC5.71□□□□□ -1.5
VTNP04004 AP005131.7-201ENST00000610087 611 ntBASIC5.71□□□□□ -1.5
VTNP04004 AL627230.1-201ENST00000613077 211 ntBASIC5.71□□□□□ -1.5
VTNP04004 AC020658.4-201ENST00000613987 684 ntBASIC5.71□□□□□ -1.5
VTNP04004 AC100827.5-201ENST00000615883 426 ntBASIC5.71□□□□□ -1.5
VTNP04004 AL591926.8-201ENST00000616876 211 ntBASIC5.71□□□□□ -1.5
VTNP04004 MIR6133-201ENST00000617057 108 ntBASIC5.71□□□□□ -1.5
VTNP04004 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.71□□□□□ -1.5
VTNP04004 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.71□□□□□ -1.5
VTNP04004 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.71□□□□□ -1.5
VTNP04004 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.71□□□□□ -1.5
VTNP04004 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTNP04004 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.7□□□□□ -1.5
VTNP04004 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.7□□□□□ -1.5
VTNP04004 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.7□□□□□ -1.5
VTNP04004 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.7□□□□□ -1.5
VTNP04004 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VTNP04004 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTNP04004 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VTNP04004 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTNP04004 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VTNP04004 SNORA70.6-201ENST00000383934 134 ntBASIC5.7□□□□□ -1.5
VTNP04004 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VTNP04004 RN7SKP114-201ENST00000410327 279 ntBASIC5.7□□□□□ -1.5
VTNP04004 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.7□□□□□ -1.5
VTNP04004 AC017019.1-201ENST00000426129 261 ntBASIC5.7□□□□□ -1.5
VTNP04004 UBE2V2P3-201ENST00000433562 437 ntBASIC5.7□□□□□ -1.5
VTNP04004 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.7□□□□□ -1.5
VTNP04004 AL772161.1-201ENST00000439130 476 ntBASIC5.7□□□□□ -1.5
VTNP04004 RPL34P20-201ENST00000442771 351 ntBASIC5.7□□□□□ -1.5
VTNP04004 SUMO2P1-206ENST00000445436 284 ntBASIC5.7□□□□□ -1.5
VTNP04004 TRY2P-201ENST00000448860 689 ntBASIC5.7□□□□□ -1.5
VTNP04004 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.7□□□□□ -1.5
VTNP04004 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.7□□□□□ -1.5
VTNP04004 TAAR4P-201ENST00000454843 1039 ntBASIC5.7□□□□□ -1.5
VTNP04004 RN7SL189P-201ENST00000468631 289 ntBASIC5.7□□□□□ -1.5
VTNP04004 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
VTNP04004 AC136777.2-201ENST00000522979 358 ntBASIC5.7□□□□□ -1.5
VTNP04004 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.7□□□□□ -1.5
VTNP04004 AC005000.1-201ENST00000536192 288 ntBASIC5.7□□□□□ -1.5
VTNP04004 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.7□□□□□ -1.5
VTNP04004 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTNP04004 AC005229.3-201ENST00000603438 323 ntBASIC5.7□□□□□ -1.5
VTNP04004 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.7□□□□□ -1.5
VTNP04004 AP005212.4-201ENST00000614206 710 ntBASIC5.7□□□□□ -1.5
VTNP04004 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
VTNP04004 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VTNP04004 NXF4-202ENST00000416098 1465 ntBASIC5.7□□□□□ -1.5
VTNP04004 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VTNP04004 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VTNP04004 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTNP04004 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
VTNP04004 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VTNP04004 INTS6P1-201ENST00000504674 2530 ntBASIC5.69□□□□□ -1.5
VTNP04004 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTNP04004 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VTNP04004 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTNP04004 OR9G4-201ENST00000302957 984 ntBASIC5.69□□□□□ -1.5
VTNP04004 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.69□□□□□ -1.5
VTNP04004 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VTNP04004 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.69□□□□□ -1.5
VTNP04004 MIR589-201ENST00000385238 99 ntBASIC5.69□□□□□ -1.5
VTNP04004 AL139128.1-201ENST00000413921 941 ntBASIC5.69□□□□□ -1.5
VTNP04004 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.69□□□□□ -1.5
VTNP04004 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.69□□□□□ -1.5
VTNP04004 DDX39BP1-205ENST00000422507 192 ntBASIC5.69□□□□□ -1.5
VTNP04004 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.69□□□□□ -1.5
VTNP04004 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.69□□□□□ -1.5
VTNP04004 NFYAP1-201ENST00000431953 972 ntBASIC5.69□□□□□ -1.5
VTNP04004 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.69□□□□□ -1.5
VTNP04004 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms