Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC008410.1-201ENST00000483777 339 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 RPS3AP6-201ENST00000484430 795 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 RPSAP51-201ENST00000497462 645 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 RPS17P5-201ENST00000498293 408 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 NENFP3-201ENST00000503735 313 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 GLUD1P3-202ENST00000508551 200 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.93□□□□□ -1.62
LMX1BO60663 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC034244.2-201ENST00000514668 858 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AC097486.1-201ENST00000515331 210 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 BX510359.5-201ENST00000515651 304 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 RNU6-1102P-201ENST00000516149 96 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 RNA5SP34-201ENST00000516887 130 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.93□□□□□ -1.62
LMX1BO60663 CIR1P1-201ENST00000524055 1133 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.93□□□□□ -1.62
LMX1BO60663 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.93□□□□□ -1.62
LMX1BO60663 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.93□□□□□ -1.62
LMX1BO60663 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC009962.1-201ENST00000567327 3813 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC090286.3-201ENST00000573133 187 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC013244.3-201ENST00000605614 388 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 OR7M1P-201ENST00000608946 533 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AC079395.2-201ENST00000610982 737 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 MIR6133-201ENST00000617057 108 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC097460.3-201ENST00000623099 442 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LMX1BO60663 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC132825.8-201ENST00000640783 297 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
LMX1BO60663 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LMX1BO60663 AC007938.2-201ENST00000604666 2634 ntBASIC4.93□□□□□ -1.62
LMX1BO60663 HSPD1P7-201ENST00000447985 1686 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LMX1BO60663 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LMX1BO60663 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
LMX1BO60663 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMX1BO60663 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LMX1BO60663 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
LMX1BO60663 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LMX1BO60663 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LMX1BO60663 AL159987.1-201ENST00000347911 293 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AL121886.1-201ENST00000358609 435 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 RNU1-19P-201ENST00000363306 165 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 RN7SKP162-201ENST00000363605 345 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AC007618.1-201ENST00000366455 732 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.92□□□□□ -1.62
LMX1BO60663 MIR937-201ENST00000401271 86 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.92□□□□□ -1.62
LMX1BO60663 RNU6-584P-201ENST00000410350 95 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.92□□□□□ -1.62
LMX1BO60663 NPM1P4-201ENST00000414095 812 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.92□□□□□ -1.62
LMX1BO60663 AL133482.1-201ENST00000415988 498 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.92□□□□□ -1.62
LMX1BO60663 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.92□□□□□ -1.62
LMX1BO60663 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.92□□□□□ -1.62
LMX1BO60663 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.92□□□□□ -1.62
LMX1BO60663 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.92□□□□□ -1.62
LMX1BO60663 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.92□□□□□ -1.62
LMX1BO60663 MRPL50P1-201ENST00000431951 384 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.92□□□□□ -1.62
LMX1BO60663 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.92□□□□□ -1.62
LMX1BO60663 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.92□□□□□ -1.62
LMX1BO60663 AC092473.1-201ENST00000441098 221 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AC073909.1-201ENST00000447112 999 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.92□□□□□ -1.62
LMX1BO60663 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.92□□□□□ -1.62
LMX1BO60663 SBDSP1-204ENST00000453858 737 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 C1DP3-201ENST00000455013 423 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 RN7SL197P-201ENST00000466981 299 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 DEFB109A-201ENST00000482450 265 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AC099521.1-201ENST00000482557 334 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.92□□□□□ -1.62
LMX1BO60663 AC108693.1-201ENST00000496068 432 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.92□□□□□ -1.62
LMX1BO60663 AC093534.1-201ENST00000504977 132 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AC098862.1-201ENST00000504991 413 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.92□□□□□ -1.62
LMX1BO60663 AC096571.1-202ENST00000506634 735 ntBASIC4.92□□□□□ -1.62
LMX1BO60663 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LMX1BO60663 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
LMX1BO60663 RN7SKP5-201ENST00000517045 272 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms