Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CLCF1Q9UBD9 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC004076.2-201ENST00000620532 3323 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC109446.4-201ENST00000623235 2755 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 RNU1-106P-201ENST00000384382 164 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AL645927.1-201ENST00000396783 406 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 HSPA8P15-201ENST00000401676 786 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC016769.2-201ENST00000414815 475 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC013268.2-201ENST00000420753 337 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 NFYAP1-201ENST00000431953 972 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 GAPDHP58-201ENST00000438477 1006 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC079168.1-201ENST00000458741 345 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 RPL5P16-201ENST00000471467 790 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 RPS18P6-201ENST00000476880 458 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 BX284632.1-201ENST00000478218 541 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC135999.1-201ENST00000478962 479 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 RPL7P40-201ENST00000481703 745 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 RPSAP50-201ENST00000481955 852 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 MIR3691-201ENST00000578066 90 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC016839.1-201ENST00000578162 867 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC010487.1-201ENST00000594408 1172 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC005252.1-201ENST00000604518 1063 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC244107.2-201ENST00000611773 76 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AC087821.1-201ENST00000623639 567 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 AL355488.2-201ENST00000609909 2850 ntBASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCF1Q9UBD9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC004158.1-201ENST00000564508 4319 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC007342.5-201ENST00000571340 2142 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 Z95331.1-201ENST00000623075 23112 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC138907.8-201ENST00000623981 2256 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 RN7SKP185-201ENST00000362813 326 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 U3.36-201ENST00000408418 213 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 RN7SL329P-201ENST00000467740 299 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 RN7SKP5-201ENST00000517045 272 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC136777.2-201ENST00000522979 358 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 OR8Q1P-201ENST00000526467 655 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC115989.2-201ENST00000578640 563 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC002069.2-201ENST00000603580 883 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AL445222.1-201ENST00000607259 628 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC068870.2-201ENST00000620635 389 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AP003400.3-201ENST00000624904 346 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 CASC19-222ENST00000641321 1173 ntBASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLCF1Q9UBD9 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms