Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 RPS4XP20-201ENST00000505751 772 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 UGT2A3P7-201ENST00000510485 734 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC012400.1-201ENST00000518452 381 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 IGKV3D-34-201ENST00000522638 302 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC127381.1-201ENST00000555979 939 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC127024.5-201ENST00000580085 462 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AP005432.2-201ENST00000608162 586 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC079395.2-201ENST00000610982 737 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 AC008833.1-201ENST00000611633 691 ntBASIC5.2□□□□□ -1.58
TREX1Q9NSU2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TREX1Q9NSU2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 MRRFP1-201ENST00000435941 1675 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 U3.2-201ENST00000362981 210 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AL358178.1-201ENST00000407698 397 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 U3.32-201ENST00000408116 212 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 MIR1182-201ENST00000408363 97 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 MARK2P12-201ENST00000420129 585 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC108075.1-201ENST00000424692 529 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AL121776.1-201ENST00000429337 372 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 RPS29P10-201ENST00000439197 166 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 SPRYD7P1-201ENST00000443861 570 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 Z92846.1-201ENST00000456203 268 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC011225.1-201ENST00000457751 369 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC005412.2-201ENST00000492004 341 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 PGAM1P13-201ENST00000507497 754 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC018695.5-201ENST00000605872 315 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AL451049.1-201ENST00000608672 497 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC109309.2-201ENST00000612597 332 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AL122125.1-201ENST00000616999 600 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 AC235565.1-201ENST00000456962 1325 ntBASIC5.19□□□□□ -1.58
TREX1Q9NSU2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TREX1Q9NSU2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 GVINP1-202ENST00000531871 7271 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 EI24P3-201ENST00000399046 1062 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AL390316.1-201ENST00000406279 553 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 OR3A2-201ENST00000408891 1076 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 EIF3LP3-201ENST00000495197 822 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AC134349.2-201ENST00000535136 910 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AC010503.3-201ENST00000594355 540 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 FKBP1AP1-201ENST00000594588 318 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AC015660.5-201ENST00000623238 564 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 AC135068.12-201ENST00000637370 931 ntBASIC5.18□□□□□ -1.58
TREX1Q9NSU2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.18□□□□□ -1.58
TREX1Q9NSU2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms