Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 RNU6-532P-201ENST00000384318 107 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC073136.2-201ENST00000417282 849 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 RPS4XP5-201ENST00000419038 768 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 IPPKP1-201ENST00000422501 768 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 MTCYBP12-201ENST00000440559 1134 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AP002345.1-201ENST00000456493 928 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 NIP7P2-201ENST00000485801 544 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC073610.1-201ENST00000489971 396 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 RN7SL57P-201ENST00000493687 290 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC078878.1-201ENST00000539832 958 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AL359219.2-201ENST00000555184 348 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 AL356801.1-201ENST00000559320 294 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC068714.1-201ENST00000559623 800 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AC006115.2-201ENST00000596823 202 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 MIMT1-201ENST00000597105 1050 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 OR5AC4P-202ENST00000642086 985 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 MAPK10-328ENST00000641553 4009 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 PDZK1P1-202ENST00000425209 1350 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
VMP1Q96GC9 AL445437.1-201ENST00000623157 3087 ntBASIC5.51□□□□□ -1.53
VMP1Q96GC9 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VMP1Q96GC9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VMP1Q96GC9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VMP1Q96GC9 LINC01109-201ENST00000603837 3081 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VMP1Q96GC9 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VMP1Q96GC9 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VMP1Q96GC9 RNU1-150P-201ENST00000362491 162 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 RN7SKP185-201ENST00000362813 326 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 RNA5SP223-201ENST00000365174 120 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VMP1Q96GC9 AL391422.1-201ENST00000402155 436 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 SNORA11.3-201ENST00000408471 128 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 RPS26P47-201ENST00000427219 348 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 PCBP2P1-201ENST00000437262 977 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VMP1Q96GC9 RSU1P1-201ENST00000453416 441 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 AC011476.1-201ENST00000466725 307 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 AC099521.1-201ENST00000482557 334 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 EIF3LP3-201ENST00000495197 822 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 RPSAP51-201ENST00000497462 645 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 RNU6-751P-201ENST00000516382 101 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 TRIM51DP-201ENST00000529746 596 ntBASIC5.5□□□□□ -1.53
VMP1Q96GC9 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.5□□□□□ -1.53
VMP1Q96GC9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms