Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RTP4Q96DX8 RN7SKP162-201ENST00000363605 345 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 RN7SKP124-201ENST00000364730 341 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 AL607077.1-201ENST00000401718 499 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RTP4Q96DX8 AL355433.1-201ENST00000422804 300 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 TNPO1P1-201ENST00000423641 1138 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 CR848007.2-201ENST00000424918 787 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 FAR1P1-201ENST00000427163 934 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 AL590623.1-201ENST00000427864 105 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 MAPRE1P3-201ENST00000435438 796 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 FMO7P-201ENST00000436045 768 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 AL691517.1-201ENST00000440833 1235 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 AL163193.1-201ENST00000444895 788 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 OR52E3P-201ENST00000452083 936 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 MTCYBP14-201ENST00000457471 715 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 RN7SL72P-201ENST00000460697 269 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 SIAH1P1-201ENST00000479411 923 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 AC108693.1-201ENST00000496068 432 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RTP4Q96DX8 AC008628.1-201ENST00000508663 265 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 NMNAT1P5-201ENST00000559657 841 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 RBM22P12-201ENST00000567098 1255 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 MIR1273E-201ENST00000581165 102 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 MIR4660-201ENST00000583549 74 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 SUMO2P15-201ENST00000604285 278 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 PCA3_2.1-201ENST00000612507 409 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 AC006249.1-201ENST00000621223 471 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 AC099654.6-201ENST00000636487 512 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 AC079298.1-201ENST00000625026 1619 ntBASIC5.54□□□□□ -1.52
RTP4Q96DX8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RTP4Q96DX8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RTP4Q96DX8 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RTP4Q96DX8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RTP4Q96DX8 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RTP4Q96DX8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RTP4Q96DX8 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.54□□□□□ -1.52
RTP4Q96DX8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RTP4Q96DX8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RTP4Q96DX8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RTP4Q96DX8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTP4Q96DX8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RTP4Q96DX8 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RTP4Q96DX8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 OR9K1P-201ENST00000326513 941 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 RN7SKP28-201ENST00000364770 305 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 OR1L6-202ENST00000373684 1044 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 RNA5SP187-201ENST00000384400 119 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 AL355143.1-201ENST00000407101 841 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 NPM1P4-201ENST00000414095 812 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 OR6E1P-201ENST00000414424 923 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 UBE2V1P6-201ENST00000430840 422 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 CBX1P5-201ENST00000475330 559 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 HMGB1P44-201ENST00000508597 572 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 EIF3KP3-201ENST00000514461 639 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 IGLV2-28-201ENST00000520681 304 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 MTND5P21-201ENST00000531961 522 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 AC027026.1-201ENST00000532323 742 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 BNIP3P40-201ENST00000596017 556 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 AL713998.2-201ENST00000604538 1198 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 BNIP3P19-201ENST00000605397 577 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 SNORA35B-201ENST00000607417 129 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.53□□□□□ -1.52
RTP4Q96DX8 AC008115.3-201ENST00000614874 549 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 AL356490.1-201ENST00000623079 479 ntBASIC5.53□□□□□ -1.52
RTP4Q96DX8 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms