Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AC006427.1-201ENST00000514359 712 ntBASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 IGLV2-28-201ENST00000520681 304 ntBASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 OR51C1P-201ENST00000608504 942 ntBASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AP005131.7-201ENST00000610087 611 ntBASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AP002505.2-201ENST00000623585 696 ntBASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 ZNF733P-202ENST00000444809 1573 ntBASIC5.29□□□□□ -1.56
ECHDC3Q96DC8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 RN7SKP153-201ENST00000365026 316 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 RNU4-34P-201ENST00000410431 124 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 GNG5P5-201ENST00000420444 220 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AL354766.1-201ENST00000423396 542 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 HSPD1P12-201ENST00000429127 1069 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 CLUHP1-201ENST00000435012 1190 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 RPL12P18-201ENST00000437175 325 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 MYO5BP2-201ENST00000449815 1277 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC110749.1-201ENST00000462007 357 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 BX284632.1-201ENST00000478218 541 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC093827.1-201ENST00000480094 861 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 RPL7P41-201ENST00000485823 957 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC022133.1-201ENST00000490961 571 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC112184.1-201ENST00000505179 312 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 IMPA1P1-201ENST00000510718 842 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC021193.1-201ENST00000511607 420 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC022832.1-201ENST00000530718 645 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 HAUS8P1-201ENST00000549005 542 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 OR11J2P-201ENST00000555298 907 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 SDR42E1P1-201ENST00000611327 477 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AL139407.1-201ENST00000613826 1175 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AC016769.4-201ENST00000616893 535 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 SAMMSON-227ENST00000642114 1199 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 C4BPAP1-201ENST00000415474 1893 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 AP000473.2-201ENST00000602659 1537 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 TET1P1-201ENST00000426627 2301 ntBASIC5.28□□□□□ -1.56
ECHDC3Q96DC8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 MIR133A2-201ENST00000347538 102 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 U8.4-201ENST00000363626 134 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 MIR589-201ENST00000385238 99 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 MIR1182-201ENST00000408363 97 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 DPPA2P3-201ENST00000411853 655 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 RN7SL814P-201ENST00000487715 300 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 GTF2F2P1-201ENST00000511083 675 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 AC012400.1-201ENST00000518452 381 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 TAS2R6P-201ENST00000605022 826 ntBASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ECHDC3Q96DC8 MIR6839-201ENST00000620425 113 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms