Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 THEM7P-201ENST00000419556 672 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-CQ95604 DYNLL1P7-201ENST00000429273 258 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.83□□□□□ -1.16
HLA-CQ95604 RPL31P35-201ENST00000431058 377 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-CQ95604 SNRPEP7-201ENST00000438350 220 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 RPS10P18-201ENST00000442662 495 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 TIMM8BP2-201ENST00000445940 251 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 Y_RNA.631-201ENST00000459607 101 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 SNORD19B-201ENST00000459623 84 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.83□□□□□ -1.16
HLA-CQ95604 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC7.83□□□□□ -1.16
HLA-CQ95604 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-CQ95604 AC006390.1-201ENST00000508068 283 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 COX6B1P4-201ENST00000519826 484 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.83□□□□□ -1.16
HLA-CQ95604 AC090424.1-201ENST00000535243 736 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.83□□□□□ -1.16
HLA-CQ95604 AL109766.1-201ENST00000555080 552 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.83□□□□□ -1.16
HLA-CQ95604 MIR544B-201ENST00000582372 78 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 HMGN1P30-201ENST00000589286 268 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-CQ95604 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-CQ95604 AL161734.1-201ENST00000609720 557 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AL355472.4-201ENST00000610233 626 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-CQ95604 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-CQ95604 AL591926.1-201ENST00000620542 217 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AC073593.1-201ENST00000624500 411 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AC099654.6-201ENST00000636487 512 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-CQ95604 AC010928.1-201ENST00000592477 1447 ntBASIC7.83□□□□□ -1.16
HLA-CQ95604 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-CQ95604 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-CQ95604 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HLA-CQ95604 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC7.83□□□□□ -1.16
HLA-CQ95604 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
HLA-CQ95604 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-CQ95604 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.83□□□□□ -1.16
HLA-CQ95604 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 Y_RNA.387-201ENST00000383918 102 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 MIR99A-201ENST00000384906 81 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 MIR555-201ENST00000384987 96 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AL359704.1-201ENST00000411586 781 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.82□□□□□ -1.16
HLA-CQ95604 OR1AA1P-201ENST00000419597 916 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC024082.2-201ENST00000434771 238 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AL731892.1-201ENST00000437364 1192 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 GTF2IP13-201ENST00000438487 386 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 RPS27AP15-201ENST00000447672 466 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.82□□□□□ -1.16
HLA-CQ95604 AC079193.1-201ENST00000460497 588 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC097493.1-201ENST00000463958 372 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC090096.1-201ENST00000489168 390 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 FTH1P23-201ENST00000492727 550 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 KLHL2P1-201ENST00000508691 521 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 Y_RNA.691-201ENST00000516611 103 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.82□□□□□ -1.16
HLA-CQ95604 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 OR5BK1P-201ENST00000550421 823 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC079075.1-201ENST00000559543 878 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 LINC00622-201ENST00000562811 1570 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC093519.1-201ENST00000566109 298 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 MTCYBP13-201ENST00000578634 1093 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 MIR3157-201ENST00000578688 85 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 MIR4312-201ENST00000579909 76 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
HLA-CQ95604 AP001180.3-201ENST00000582221 145 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 MIR548Y-201ENST00000582739 110 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AL953862.2-201ENST00000603089 820 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 SNRPGP17-201ENST00000603780 214 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AL133338.2-201ENST00000604292 736 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AL499605.1-201ENST00000604628 403 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 7SK.12-201ENST00000612820 244 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC023509.5-201ENST00000617434 807 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC068831.8-201ENST00000620171 435 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 MIR6823-201ENST00000622118 61 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 MIR6806-201ENST00000622141 64 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 C2orf27A-204ENST00000623058 969 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AC005858.4-201ENST00000623191 700 ntBASIC7.82□□□□□ -1.16
HLA-CQ95604 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 CELF2-212ENST00000632728 3827 ntAPPRIS P3 TSL 5 BASIC7.82□□□□□ -1.16
HLA-CQ95604 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms