Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 RN7SL722P-201ENST00000617780 284 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 RN7SL565P-201ENST00000618246 284 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 ADAM5-202ENST00000399789 1942 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 OR55B1P-203ENST00000641518 2602 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 RNA5SP487-201ENST00000410186 122 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 MTCYBP21-201ENST00000443300 1113 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 BRD9P1-201ENST00000529855 560 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 OR11J2P-201ENST00000555298 907 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 RN7SL290P-201ENST00000578661 300 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 AP000432.2-201ENST00000624164 2048 ntBASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM3Q8TF72 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 AC131971.1-201ENST00000332881 1482 ntBASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 MAPK10-286ENST00000641208 8747 ntBASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 RNU1-106P-201ENST00000384382 164 ntBASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 RN7SL51P-201ENST00000468230 285 ntBASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 RPS18P6-201ENST00000476880 458 ntBASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 YWHABP2-201ENST00000540201 713 ntBASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 AC010480.1-201ENST00000624823 684 ntBASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM3Q8TF72 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 OR1L6-202ENST00000373684 1044 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 RNA5SP87-201ENST00000384155 118 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 AC007537.2-201ENST00000472093 511 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 RPS24P16-201ENST00000497294 392 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 AC006427.1-201ENST00000514359 712 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 PCNPP1-201ENST00000552501 511 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 AL591135.1-201ENST00000401578 5914 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 MIR765-201ENST00000390226 114 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 AC092647.2-201ENST00000452998 253 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 AC105233.1-201ENST00000498840 781 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 IGBP1P4-201ENST00000503202 879 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 HMGB1P40-201ENST00000525121 540 ntBASIC5.36□□□□□ -1.55
SHROOM3Q8TF72 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms