Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC105399.1-202ENST00000447303 205 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 RNU6-513P-201ENST00000516104 104 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 AC078878.1-201ENST00000539832 958 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 BNIP3P1-201ENST00000547295 580 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 BNIP3P41-202ENST00000616656 861 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 MTCO1P1-201ENST00000624263 1081 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 AL731566.1-201ENST00000620490 1937 ntBASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.18□□□□□ -1.58
NUDCD3Q8IVD9 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC104260.2-201ENST00000623551 3497 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AL035079.1-201ENST00000405210 287 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC013429.2-201ENST00000418798 781 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 OR2AH1P-201ENST00000425717 928 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC009238.2-201ENST00000431026 355 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC110602.1-201ENST00000437414 318 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 MRPL35P2-201ENST00000448009 511 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 CTSLP6-201ENST00000458273 1002 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 RN7SL168P-201ENST00000463821 279 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC006427.1-201ENST00000514359 712 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 Vault.2-201ENST00000516519 98 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC060775.1-201ENST00000518241 520 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 YWHABP2-201ENST00000540201 713 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AL390334.1-201ENST00000556395 450 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC008115.3-201ENST00000614874 549 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC108359.1-201ENST00000616451 1211 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC015660.5-201ENST00000623238 564 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC132068.1-201ENST00000623805 459 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUDCD3Q8IVD9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AC092111.2-201ENST00000611627 1414 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 RN7SKP187-201ENST00000365536 330 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 RNU6-167P-201ENST00000384292 106 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AL078599.1-201ENST00000402075 293 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AL390316.1-201ENST00000406279 553 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 Z93019.1-201ENST00000416450 973 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AC066692.1-201ENST00000421721 457 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 HSPE1P16-201ENST00000426640 348 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 Z84478.1-201ENST00000438230 1219 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 BTF3P6-201ENST00000448054 499 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AC011476.1-201ENST00000466725 307 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 RPL7P40-201ENST00000481703 745 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 OR11I1P-201ENST00000486033 954 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 HMGB3P16-201ENST00000508037 287 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 AC109481.1-201ENST00000509173 282 ntBASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.16□□□□□ -1.58
NUDCD3Q8IVD9 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms