Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 MTCO1P53-201ENST00000441633 699 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 RPL38P3-201ENST00000484463 213 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 RN7SL193P-201ENST00000491708 276 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC010374.1-201ENST00000503762 1237 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC108120.2-201ENST00000512973 294 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 RNA5SP271-201ENST00000516700 88 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 SNORA81.2-201ENST00000516868 170 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 IGKV2-19-201ENST00000518132 283 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 IGKV3D-34-201ENST00000522638 302 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 LRRC34P1-201ENST00000542742 915 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC092121.1-201ENST00000569452 202 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 MIR3614-201ENST00000581261 86 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC068020.1-201ENST00000594215 661 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 SNX6P1-201ENST00000601728 1224 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC130352.1-201ENST00000602979 661 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC067838.1-201ENST00000606064 577 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 MIR6862-1-201ENST00000613016 70 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AL021918.2-201ENST00000613415 194 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 MIR6862-2-201ENST00000614755 70 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 MIR6729-201ENST00000618194 65 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 RPL23AP61-201ENST00000623642 466 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC006963.1-201ENST00000624003 1052 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC068057.2-201ENST00000624047 895 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AP000676.4-201ENST00000624659 623 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 AC132825.7-201ENST00000638744 335 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 NEPNP-201ENST00000404786 1371 ntBASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTCHD3Q3KNS1 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 DDX18P6-201ENST00000450119 1997 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 ZNF29P-201ENST00000225587 168 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 RNA5SP105-201ENST00000391123 113 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 RNU4-74P-201ENST00000411280 161 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 UBE2V1P11-201ENST00000411559 285 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AL445183.3-201ENST00000414168 502 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 RPS4XP5-201ENST00000419038 768 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 PNRC2P1-201ENST00000423940 420 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 NDUFS5P5-201ENST00000437256 321 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 RPS12P17-201ENST00000438591 377 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 MED6P1-201ENST00000439659 713 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 SNRPFP2-201ENST00000440710 251 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 DNAJC19P5-201ENST00000443295 316 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 BMS1P10-201ENST00000443754 1120 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC023512.1-201ENST00000444513 499 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 PPIAP20-201ENST00000449839 135 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 CYCSP42-201ENST00000450823 238 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 OSTCP1-201ENST00000455507 450 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 RPL5P13-201ENST00000462840 709 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC005412.2-201ENST00000492004 341 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 SNORD46.2-201ENST00000516021 102 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 snoU109.5-201ENST00000516231 132 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC091163.3-201ENST00000518269 1144 ntBASIC5.75□□□□□ -1.49
PTCHD3Q3KNS1 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms