Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 TAS2R6P-201ENST00000605022 826 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 OR8G7P-201ENST00000616658 848 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 MIR6071-201ENST00000616741 78 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 AL512356.3-201ENST00000623005 461 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 AC015871.5-202ENST00000623252 701 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX4Q33E94 AC008691.1-209ENST00000642094 814 ntBASIC4.91□□□□□ -1.62
RFX4Q33E94 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
RFX4Q33E94 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RFX4Q33E94 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RFX4Q33E94 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX4Q33E94 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX4Q33E94 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFX4Q33E94 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFX4Q33E94 AP000542.2-201ENST00000623199 6179 ntBASIC4.9□□□□□ -1.62
RFX4Q33E94 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
RFX4Q33E94 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RFX4Q33E94 AC027279.1-201ENST00000568885 4284 ntBASIC4.9□□□□□ -1.62
RFX4Q33E94 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RFX4Q33E94 UBBP2-201ENST00000376781 231 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 MIR589-201ENST00000385238 99 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 AC013442.1-201ENST00000397347 228 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.63
RFX4Q33E94 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFX4Q33E94 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AC115283.1-201ENST00000427353 400 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AL672138.1-201ENST00000450604 1015 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 VDAC2P4-201ENST00000452925 711 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 AC011476.1-201ENST00000466725 307 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AC090142.2-201ENST00000483263 416 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.9□□□□□ -1.63
RFX4Q33E94 RN7SL346P-201ENST00000491561 294 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 AC073073.1-201ENST00000493920 463 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AC073358.1-201ENST00000505671 684 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 RNA5SP303-201ENST00000516192 130 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 RNA5SP271-201ENST00000516700 88 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 SNORA43.3-201ENST00000517240 103 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AP000859.1-201ENST00000525536 307 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 EIF4EP5-201ENST00000528228 640 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX4Q33E94 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX4Q33E94 MRPS21P7-201ENST00000566937 238 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 AL138895.2-201ENST00000603019 178 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AC009950.2-201ENST00000636548 183 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX4Q33E94 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX4Q33E94 AC021242.1-201ENST00000507315 2035 ntBASIC4.9□□□□□ -1.63
RFX4Q33E94 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFX4Q33E94 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFX4Q33E94 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.9□□□□□ -1.63
RFX4Q33E94 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RFX4Q33E94 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFX4Q33E94 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFX4Q33E94 AC106872.5-201ENST00000508856 1416 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 AC114786.1-201ENST00000512892 1415 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFX4Q33E94 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFX4Q33E94 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX4Q33E94 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RFX4Q33E94 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RFX4Q33E94 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX4Q33E94 RN7SKP125-201ENST00000410481 302 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 RN7SKP240-201ENST00000410583 375 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 RPL36AP10-201ENST00000421785 322 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 AL133173.1-201ENST00000423458 397 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX4Q33E94 NAP1L4P2-201ENST00000425958 899 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX4Q33E94 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.89□□□□□ -1.63
RFX4Q33E94 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.89□□□□□ -1.63
RFX4Q33E94 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX4Q33E94 OR10D4P-201ENST00000525892 951 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX4Q33E94 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 SETP1-201ENST00000556014 845 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 AC079315.1-201ENST00000602952 623 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 AC009597.2-201ENST00000604659 592 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 AC011626.1-201ENST00000604710 562 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 PPATP2-201ENST00000605635 508 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.89□□□□□ -1.63
RFX4Q33E94 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms