Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 HNRNPCP1-201ENST00000556181 766 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.11□□□□□ -1.43
GABPAQ06546 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.11□□□□□ -1.43
GABPAQ06546 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.11□□□□□ -1.43
GABPAQ06546 INTS6P1-201ENST00000504674 2530 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 AC004656.1-201ENST00000568479 4951 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABPAQ06546 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
GABPAQ06546 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABPAQ06546 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
GABPAQ06546 TTC41P-205ENST00000551270 3963 ntBASIC6.11□□□□□ -1.43
GABPAQ06546 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABPAQ06546 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GABPAQ06546 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GABPAQ06546 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
GABPAQ06546 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.1□□□□□ -1.43
GABPAQ06546 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.1□□□□□ -1.43
GABPAQ06546 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.1□□□□□ -1.43
GABPAQ06546 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.1□□□□□ -1.43
GABPAQ06546 AC009784.1-201ENST00000426484 460 ntBASIC6.1□□□□□ -1.43
GABPAQ06546 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.1□□□□□ -1.43
GABPAQ06546 AL161722.2-201ENST00000434731 981 ntBASIC6.1□□□□□ -1.43
GABPAQ06546 AC023271.1-201ENST00000445936 1090 ntBASIC6.1□□□□□ -1.43
GABPAQ06546 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.1□□□□□ -1.43
GABPAQ06546 HMGN2P25-201ENST00000486956 268 ntBASIC6.1□□□□□ -1.43
GABPAQ06546 RN7SL591P-201ENST00000496150 292 ntBASIC6.1□□□□□ -1.43
GABPAQ06546 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.1□□□□□ -1.43
GABPAQ06546 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.1□□□□□ -1.43
GABPAQ06546 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.1□□□□□ -1.43
GABPAQ06546 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.1□□□□□ -1.43
GABPAQ06546 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.1□□□□□ -1.43
GABPAQ06546 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.1□□□□□ -1.43
GABPAQ06546 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.1□□□□□ -1.43
GABPAQ06546 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.1□□□□□ -1.43
GABPAQ06546 MIR4420-201ENST00000583944 77 ntBASIC6.1□□□□□ -1.43
GABPAQ06546 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 AL161912.3-201ENST00000605404 628 ntBASIC6.1□□□□□ -1.43
GABPAQ06546 AC087385.3-201ENST00000620477 187 ntBASIC6.1□□□□□ -1.43
GABPAQ06546 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
GABPAQ06546 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.1□□□□□ -1.43
GABPAQ06546 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.1□□□□□ -1.43
GABPAQ06546 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.1□□□□□ -1.43
GABPAQ06546 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GABPAQ06546 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
GABPAQ06546 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
GABPAQ06546 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.09□□□□□ -1.43
GABPAQ06546 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 MIPEPP2-201ENST00000422560 1819 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
GABPAQ06546 RN7SKP145-201ENST00000363291 303 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 RN7SKP153-201ENST00000365026 316 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 MIR585-201ENST00000384887 94 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 RNU6-316P-201ENST00000391027 107 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 RPL7P58-201ENST00000402913 758 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 AL158827.1-201ENST00000416300 391 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.09□□□□□ -1.43
GABPAQ06546 RPL7AP49-201ENST00000429522 581 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 AL591438.1-201ENST00000433508 581 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 MRPS21P3-201ENST00000436696 262 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 REG1CP-206ENST00000447469 496 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.09□□□□□ -1.43
GABPAQ06546 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.09□□□□□ -1.43
GABPAQ06546 AP003080.1-202ENST00000526526 915 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 AC008033.2-201ENST00000542626 177 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.09□□□□□ -1.43
GABPAQ06546 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.09□□□□□ -1.43
GABPAQ06546 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.09□□□□□ -1.43
GABPAQ06546 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.09□□□□□ -1.43
GABPAQ06546 AC005229.3-201ENST00000603438 323 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 AC073575.2-201ENST00000614212 627 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 MIR6839-201ENST00000620425 113 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.09□□□□□ -1.43
GABPAQ06546 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
GABPAQ06546 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
GABPAQ06546 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
GABPAQ06546 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.09□□□□□ -1.43
GABPAQ06546 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
GABPAQ06546 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
GABPAQ06546 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
GABPAQ06546 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
GABPAQ06546 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
GABPAQ06546 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms