Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
RIPK4P57078 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
RIPK4P57078 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.82□□□□□ -1.32
RIPK4P57078 OR1L6-202ENST00000373684 1044 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 RNU1-74P-201ENST00000384108 171 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 RPL23AP27-201ENST00000415161 451 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.82□□□□□ -1.32
RIPK4P57078 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 AL161722.2-201ENST00000434731 981 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 PTMAP6-201ENST00000439110 327 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 RPSAP50-201ENST00000481955 852 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.82□□□□□ -1.32
RIPK4P57078 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.82□□□□□ -1.32
RIPK4P57078 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.82□□□□□ -1.32
RIPK4P57078 EIF3KP3-201ENST00000514461 639 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RIPK4P57078 AP002373.2-201ENST00000541631 1060 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.82□□□□□ -1.32
RIPK4P57078 RN7SL290P-201ENST00000578661 300 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.82□□□□□ -1.32
RIPK4P57078 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.82□□□□□ -1.32
RIPK4P57078 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.82□□□□□ -1.32
RIPK4P57078 RPSAP73-201ENST00000614820 330 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 AC118658.2-201ENST00000618697 459 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
RIPK4P57078 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.82□□□□□ -1.32
RIPK4P57078 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.82□□□□□ -1.32
RIPK4P57078 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
RIPK4P57078 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RIPK4P57078 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RIPK4P57078 AC114947.2-201ENST00000565748 2125 ntBASIC6.82□□□□□ -1.32
RIPK4P57078 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
RIPK4P57078 AC133552.1-201ENST00000569988 4007 ntBASIC6.81□□□□□ -1.32
RIPK4P57078 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
RIPK4P57078 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.81□□□□□ -1.32
RIPK4P57078 AC063923.1-201ENST00000478982 1619 ntBASIC6.81□□□□□ -1.32
RIPK4P57078 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RIPK4P57078 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RIPK4P57078 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 AC090018.1-201ENST00000434369 367 ntBASIC6.81□□□□□ -1.32
RIPK4P57078 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.81□□□□□ -1.32
RIPK4P57078 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.81□□□□□ -1.32
RIPK4P57078 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.81□□□□□ -1.32
RIPK4P57078 AC138832.1-201ENST00000522871 556 ntBASIC6.81□□□□□ -1.32
RIPK4P57078 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RIPK4P57078 AC044860.2-201ENST00000561005 179 ntBASIC6.81□□□□□ -1.32
RIPK4P57078 MIR4660-201ENST00000583549 74 ntBASIC6.81□□□□□ -1.32
RIPK4P57078 AC011447.4-201ENST00000587562 111 ntBASIC6.81□□□□□ -1.32
RIPK4P57078 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.81□□□□□ -1.32
RIPK4P57078 AC211433.2-201ENST00000608433 387 ntBASIC6.81□□□□□ -1.32
RIPK4P57078 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.81□□□□□ -1.32
RIPK4P57078 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.81□□□□□ -1.32
RIPK4P57078 AC006210.2-201ENST00000367074 1545 ntBASIC6.81□□□□□ -1.32
RIPK4P57078 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RIPK4P57078 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RIPK4P57078 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.8□□□□□ -1.32
RIPK4P57078 AC002525.1-201ENST00000624392 1622 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RIPK4P57078 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
RIPK4P57078 AC018765.1-201ENST00000623357 3446 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RIPK4P57078 RNA5SP507-201ENST00000363603 121 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 SNORA70-201ENST00000384436 135 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RIPK4P57078 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RIPK4P57078 SETP9-201ENST00000423837 832 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 HSPD1P12-201ENST00000429127 1069 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.8□□□□□ -1.32
RIPK4P57078 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.8□□□□□ -1.32
RIPK4P57078 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.8□□□□□ -1.32
RIPK4P57078 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.8□□□□□ -1.32
RIPK4P57078 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.8□□□□□ -1.32
RIPK4P57078 HMGN2P6-201ENST00000551091 273 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 AC051619.2-201ENST00000559063 397 ntBASIC6.8□□□□□ -1.32
RIPK4P57078 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RIPK4P57078 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.8□□□□□ -1.32
RIPK4P57078 AC023632.6-201ENST00000624338 2177 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms