Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.32□□□□□ -1.4
NUP98P52948 AC021193.1-201ENST00000511607 420 ntBASIC6.32□□□□□ -1.4
NUP98P52948 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.32□□□□□ -1.4
NUP98P52948 RAB9BP1-201ENST00000519581 626 ntBASIC6.32□□□□□ -1.4
NUP98P52948 AP001880.2-201ENST00000538233 448 ntBASIC6.32□□□□□ -1.4
NUP98P52948 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.32□□□□□ -1.4
NUP98P52948 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.32□□□□□ -1.4
NUP98P52948 MIR5096-201ENST00000583713 70 ntBASIC6.32□□□□□ -1.4
NUP98P52948 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NUP98P52948 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.32□□□□□ -1.4
NUP98P52948 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NUP98P52948 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.32□□□□□ -1.4
NUP98P52948 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.32□□□□□ -1.4
NUP98P52948 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NUP98P52948 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NUP98P52948 DHX40P1-201ENST00000588725 1412 ntBASIC6.32□□□□□ -1.4
NUP98P52948 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.32□□□□□ -1.4
NUP98P52948 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
NUP98P52948 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NUP98P52948 RN7SKP153-201ENST00000365026 316 ntBASIC6.32□□□□□ -1.4
NUP98P52948 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.32□□□□□ -1.4
NUP98P52948 AL035079.1-201ENST00000405210 287 ntBASIC6.32□□□□□ -1.4
NUP98P52948 RPS29P9-201ENST00000440360 171 ntBASIC6.32□□□□□ -1.4
NUP98P52948 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.32□□□□□ -1.4
NUP98P52948 AL691482.1-201ENST00000453255 87 ntBASIC6.32□□□□□ -1.4
NUP98P52948 RPS29P33-201ENST00000456717 146 ntBASIC6.32□□□□□ -1.4
NUP98P52948 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.32□□□□□ -1.4
NUP98P52948 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.32□□□□□ -1.4
NUP98P52948 AL034408.1-201ENST00000637712 664 ntBASIC6.32□□□□□ -1.4
NUP98P52948 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NUP98P52948 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NUP98P52948 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.31□□□□□ -1.4
NUP98P52948 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
NUP98P52948 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.31□□□□□ -1.4
NUP98P52948 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NUP98P52948 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NUP98P52948 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUP98P52948 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUP98P52948 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
NUP98P52948 RN7SKP17-201ENST00000411242 351 ntBASIC6.31□□□□□ -1.4
NUP98P52948 AC004074.1-201ENST00000421810 1063 ntBASIC6.31□□□□□ -1.4
NUP98P52948 TPT1P12-201ENST00000448968 492 ntBASIC6.31□□□□□ -1.4
NUP98P52948 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.31□□□□□ -1.4
NUP98P52948 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUP98P52948 AC093720.1-201ENST00000505681 714 ntBASIC6.31□□□□□ -1.4
NUP98P52948 EIF1P5-201ENST00000585002 234 ntBASIC6.31□□□□□ -1.4
NUP98P52948 AC020910.3-201ENST00000603701 874 ntBASIC6.31□□□□□ -1.4
NUP98P52948 AP001521.2-201ENST00000608772 546 ntBASIC6.31□□□□□ -1.4
NUP98P52948 AC119674.1-217ENST00000641942 1086 ntBASIC6.31□□□□□ -1.4
NUP98P52948 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NUP98P52948 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUP98P52948 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
NUP98P52948 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NUP98P52948 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUP98P52948 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.3□□□□□ -1.4
NUP98P52948 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP98P52948 AC010132.2-201ENST00000295493 1043 ntBASIC6.3□□□□□ -1.4
NUP98P52948 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.3□□□□□ -1.4
NUP98P52948 HMGB1P4-201ENST00000455362 567 ntBASIC6.3□□□□□ -1.4
NUP98P52948 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
NUP98P52948 SCARNA22-201ENST00000503991 125 ntBASIC6.3□□□□□ -1.4
NUP98P52948 AC022360.1-201ENST00000521058 340 ntBASIC6.3□□□□□ -1.4
NUP98P52948 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
NUP98P52948 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.3□□□□□ -1.4
NUP98P52948 AL449283.1-201ENST00000602631 3403 ntBASIC6.3□□□□□ -1.4
NUP98P52948 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NUP98P52948 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.3□□□□□ -1.4
NUP98P52948 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.3□□□□□ -1.4
NUP98P52948 AC018765.1-201ENST00000623357 3446 ntBASIC6.3□□□□□ -1.4
NUP98P52948 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
NUP98P52948 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUP98P52948 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.3□□□□□ -1.4
NUP98P52948 RNA5SP191-201ENST00000362585 102 ntBASIC6.29□□□□□ -1.4
NUP98P52948 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.29□□□□□ -1.4
NUP98P52948 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.29□□□□□ -1.4
NUP98P52948 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.29□□□□□ -1.4
NUP98P52948 NDUFA12P1-201ENST00000455914 406 ntBASIC6.29□□□□□ -1.4
NUP98P52948 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.29□□□□□ -1.4
NUP98P52948 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.29□□□□□ -1.4
NUP98P52948 MIR4697-201ENST00000582977 78 ntBASIC6.29□□□□□ -1.4
NUP98P52948 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.29□□□□□ -1.4
NUP98P52948 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NUP98P52948 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NUP98P52948 AP000547.3-204ENST00000588548 2523 ntBASIC6.29□□□□□ -1.4
NUP98P52948 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NUP98P52948 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NUP98P52948 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.29□□□□□ -1.4
NUP98P52948 AC093829.1-201ENST00000506662 1618 ntBASIC6.29□□□□□ -1.4
NUP98P52948 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NUP98P52948 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.29□□□□□ -1.4
NUP98P52948 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
NUP98P52948 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
NUP98P52948 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.29□□□□□ -1.4
NUP98P52948 RNU1-32P-201ENST00000363937 159 ntBASIC6.29□□□□□ -1.4
NUP98P52948 GLULP6-201ENST00000399502 913 ntBASIC6.29□□□□□ -1.4
NUP98P52948 AL049697.2-201ENST00000403708 294 ntBASIC6.29□□□□□ -1.4
NUP98P52948 OR51B3P-201ENST00000412287 913 ntBASIC6.29□□□□□ -1.4
NUP98P52948 HYALP1-201ENST00000417674 1279 ntBASIC6.29□□□□□ -1.4
NUP98P52948 OR2B7P-201ENST00000429302 934 ntBASIC6.29□□□□□ -1.4
NUP98P52948 ELOCP3-201ENST00000439303 348 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms