Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
USP11P51784 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC7.24□□□□□ -1.25
USP11P51784 Y_RNA.560-201ENST00000384689 102 ntBASIC7.24□□□□□ -1.25
USP11P51784 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 U3.43-201ENST00000410734 213 ntBASIC7.24□□□□□ -1.25
USP11P51784 MTCO1P17-201ENST00000411522 491 ntBASIC7.24□□□□□ -1.25
USP11P51784 AC096644.3-201ENST00000416788 338 ntBASIC7.24□□□□□ -1.25
USP11P51784 EIF1P1-201ENST00000421436 341 ntBASIC7.24□□□□□ -1.25
USP11P51784 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 RPL6P30-201ENST00000443382 862 ntBASIC7.24□□□□□ -1.25
USP11P51784 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 SUN3-208ENST00000453192 801 ntTSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 ZNF114P1-201ENST00000453500 292 ntBASIC7.24□□□□□ -1.25
USP11P51784 SEPT7P3-201ENST00000455017 621 ntBASIC7.24□□□□□ -1.25
USP11P51784 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.24□□□□□ -1.25
USP11P51784 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 AL117692.1-201ENST00000494283 713 ntBASIC7.24□□□□□ -1.25
USP11P51784 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 CDC42P4-201ENST00000510507 563 ntBASIC7.24□□□□□ -1.25
USP11P51784 AC026782.2-201ENST00000510845 636 ntBASIC7.24□□□□□ -1.25
USP11P51784 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.24□□□□□ -1.25
USP11P51784 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC7.24□□□□□ -1.25
USP11P51784 C1GALT1P3-201ENST00000522049 819 ntBASIC7.24□□□□□ -1.25
USP11P51784 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.24□□□□□ -1.25
USP11P51784 HIGD1AP10-201ENST00000527837 282 ntBASIC7.24□□□□□ -1.25
USP11P51784 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 AC009729.1-201ENST00000548873 1133 ntBASIC7.24□□□□□ -1.25
USP11P51784 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 RN7SL230P-201ENST00000580835 303 ntBASIC7.24□□□□□ -1.25
USP11P51784 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.24□□□□□ -1.25
USP11P51784 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 AC022146.1-201ENST00000595307 847 ntBASIC7.24□□□□□ -1.25
USP11P51784 AC073137.1-201ENST00000605636 634 ntBASIC7.24□□□□□ -1.25
USP11P51784 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 AC016769.4-201ENST00000616893 535 ntBASIC7.24□□□□□ -1.25
USP11P51784 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.24□□□□□ -1.25
USP11P51784 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.24□□□□□ -1.25
USP11P51784 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.24□□□□□ -1.25
USP11P51784 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
USP11P51784 ZNF833P-201ENST00000424938 1494 ntBASIC7.24□□□□□ -1.25
USP11P51784 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 SNX18P3-202ENST00000565670 1750 ntBASIC7.23□□□□□ -1.25
USP11P51784 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
USP11P51784 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 AC010168.2-201ENST00000562691 5428 ntBASIC7.23□□□□□ -1.25
USP11P51784 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 AP000547.3-204ENST00000588548 2523 ntBASIC7.23□□□□□ -1.25
USP11P51784 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 AC110373.1-201ENST00000505994 3505 ntBASIC7.23□□□□□ -1.25
USP11P51784 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.23□□□□□ -1.25
USP11P51784 Y_RNA.303-201ENST00000364998 94 ntBASIC7.23□□□□□ -1.25
USP11P51784 SNORA26.8-201ENST00000391306 124 ntBASIC7.23□□□□□ -1.25
USP11P51784 AL157702.1-201ENST00000398764 426 ntBASIC7.23□□□□□ -1.25
USP11P51784 MTCO1P56-201ENST00000401674 224 ntBASIC7.23□□□□□ -1.25
USP11P51784 AL139805.1-201ENST00000407837 289 ntBASIC7.23□□□□□ -1.25
USP11P51784 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.23□□□□□ -1.25
USP11P51784 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
USP11P51784 AC098592.1-201ENST00000419352 333 ntBASIC7.23□□□□□ -1.25
USP11P51784 VN1R20P-201ENST00000425215 966 ntBASIC7.23□□□□□ -1.25
USP11P51784 AC099782.1-201ENST00000425889 474 ntBASIC7.23□□□□□ -1.25
USP11P51784 IPMKP1-201ENST00000425988 855 ntBASIC7.23□□□□□ -1.25
USP11P51784 C1DP1-201ENST00000426049 402 ntBASIC7.23□□□□□ -1.25
USP11P51784 GAPDHP34-201ENST00000432112 823 ntBASIC7.23□□□□□ -1.25
USP11P51784 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.23□□□□□ -1.25
USP11P51784 YWHAZP7-201ENST00000436906 631 ntBASIC7.23□□□□□ -1.25
USP11P51784 LDHAP2-201ENST00000437325 985 ntBASIC7.23□□□□□ -1.25
USP11P51784 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.23□□□□□ -1.25
USP11P51784 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms