Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.19□□□□□ -1.58
RORAP35398 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 AC122688.1-201ENST00000541494 223 ntBASIC5.19□□□□□ -1.58
RORAP35398 HAUS8P1-201ENST00000549005 542 ntBASIC5.19□□□□□ -1.58
RORAP35398 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.19□□□□□ -1.58
RORAP35398 MIR4660-201ENST00000583549 74 ntBASIC5.19□□□□□ -1.58
RORAP35398 AC006272.2-201ENST00000594725 163 ntBASIC5.19□□□□□ -1.58
RORAP35398 QTRT1P1-201ENST00000604344 1078 ntBASIC5.19□□□□□ -1.58
RORAP35398 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.19□□□□□ -1.58
RORAP35398 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 AC133552.1-201ENST00000569988 4007 ntBASIC5.19□□□□□ -1.58
RORAP35398 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RORAP35398 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
RORAP35398 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RORAP35398 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.19□□□□□ -1.58
RORAP35398 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
RORAP35398 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RORAP35398 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.18□□□□□ -1.58
RORAP35398 AC004076.2-201ENST00000620532 3323 ntBASIC5.18□□□□□ -1.58
RORAP35398 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.18□□□□□ -1.58
RORAP35398 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 U3.2-201ENST00000362981 210 ntBASIC5.18□□□□□ -1.58
RORAP35398 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 SNORA16A-201ENST00000384342 137 ntBASIC5.18□□□□□ -1.58
RORAP35398 RN7SKP273-201ENST00000411392 314 ntBASIC5.18□□□□□ -1.58
RORAP35398 SMC4P1-201ENST00000414479 527 ntBASIC5.18□□□□□ -1.58
RORAP35398 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.18□□□□□ -1.58
RORAP35398 AC007394.1-201ENST00000421941 531 ntBASIC5.18□□□□□ -1.58
RORAP35398 SRSF1P1-201ENST00000424058 520 ntBASIC5.18□□□□□ -1.58
RORAP35398 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.18□□□□□ -1.58
RORAP35398 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.18□□□□□ -1.58
RORAP35398 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.18□□□□□ -1.58
RORAP35398 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.18□□□□□ -1.58
RORAP35398 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.18□□□□□ -1.58
RORAP35398 AZGP1P2-201ENST00000454506 345 ntBASIC5.18□□□□□ -1.58
RORAP35398 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 RN7SL222P-201ENST00000476452 299 ntBASIC5.18□□□□□ -1.58
RORAP35398 AC004815.1-201ENST00000484185 331 ntBASIC5.18□□□□□ -1.58
RORAP35398 AC023424.1-201ENST00000496058 459 ntBASIC5.18□□□□□ -1.58
RORAP35398 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.18□□□□□ -1.58
RORAP35398 AC111000.6-201ENST00000514471 709 ntBASIC5.18□□□□□ -1.58
RORAP35398 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.18□□□□□ -1.58
RORAP35398 OR5AM1P-201ENST00000532136 1032 ntBASIC5.18□□□□□ -1.58
RORAP35398 OR10G5P-201ENST00000532733 358 ntBASIC5.18□□□□□ -1.58
RORAP35398 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.18□□□□□ -1.58
RORAP35398 AC068993.1-201ENST00000546724 589 ntBASIC5.18□□□□□ -1.58
RORAP35398 AC044860.2-201ENST00000561005 179 ntBASIC5.18□□□□□ -1.58
RORAP35398 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.18□□□□□ -1.58
RORAP35398 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.18□□□□□ -1.58
RORAP35398 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 AC114774.1-201ENST00000507410 1770 ntBASIC5.18□□□□□ -1.58
RORAP35398 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.18□□□□□ -1.58
RORAP35398 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 TCP1P3-201ENST00000414406 1498 ntBASIC5.18□□□□□ -1.58
RORAP35398 MAPK10-328ENST00000641553 4009 ntBASIC5.18□□□□□ -1.58
RORAP35398 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RORAP35398 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.18□□□□□ -1.58
RORAP35398 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.17□□□□□ -1.58
RORAP35398 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.17□□□□□ -1.58
RORAP35398 AC112255.1-201ENST00000624070 2493 ntBASIC5.17□□□□□ -1.58
RORAP35398 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RORAP35398 AC092681.1-201ENST00000297369 291 ntBASIC5.17□□□□□ -1.58
RORAP35398 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RORAP35398 SNORA70-201ENST00000384436 135 ntBASIC5.17□□□□□ -1.58
RORAP35398 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.17□□□□□ -1.58
RORAP35398 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.17□□□□□ -1.58
RORAP35398 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.17□□□□□ -1.58
RORAP35398 NPM1P48-201ENST00000436002 853 ntBASIC5.17□□□□□ -1.58
RORAP35398 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.17□□□□□ -1.58
RORAP35398 PTMAP6-201ENST00000439110 327 ntBASIC5.17□□□□□ -1.58
RORAP35398 SNRPFP2-201ENST00000440710 251 ntBASIC5.17□□□□□ -1.58
RORAP35398 IGBP1P3-201ENST00000447449 1000 ntBASIC5.17□□□□□ -1.58
RORAP35398 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.17□□□□□ -1.58
RORAP35398 FAR2P1-206ENST00000449736 709 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms