Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNA5SP241-201ENST00000391326 114 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
SHMT2P34897 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.2□□□□□ -1.58
SHMT2P34897 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.2□□□□□ -1.58
SHMT2P34897 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHMT2P34897 GTF3AP1-201ENST00000416942 1004 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.2□□□□□ -1.58
SHMT2P34897 AL355433.1-201ENST00000422804 300 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.2□□□□□ -1.58
SHMT2P34897 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.2□□□□□ -1.58
SHMT2P34897 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.2□□□□□ -1.58
SHMT2P34897 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.2□□□□□ -1.58
SHMT2P34897 RPL7P40-201ENST00000481703 745 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SHMT2P34897 RN7SL423P-201ENST00000486202 304 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 EIF4EP5-201ENST00000528228 640 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 OR11H3P-201ENST00000554547 982 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.2□□□□□ -1.58
SHMT2P34897 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.2□□□□□ -1.58
SHMT2P34897 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SHMT2P34897 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.2□□□□□ -1.58
SHMT2P34897 Z95327.3-201ENST00000610385 572 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.2□□□□□ -1.58
SHMT2P34897 AC135068.5-201ENST00000624197 983 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.2□□□□□ -1.58
SHMT2P34897 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHMT2P34897 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SHMT2P34897 AL034549.2-201ENST00000618285 3373 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 AC100757.1-201ENST00000616872 1835 ntBASIC5.2□□□□□ -1.58
SHMT2P34897 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.2□□□□□ -1.58
SHMT2P34897 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SHMT2P34897 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHMT2P34897 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
SHMT2P34897 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.19□□□□□ -1.58
SHMT2P34897 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.19□□□□□ -1.58
SHMT2P34897 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHMT2P34897 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.19□□□□□ -1.58
SHMT2P34897 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SHMT2P34897 CR788268.1-201ENST00000603931 1809 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
SHMT2P34897 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.19□□□□□ -1.58
SHMT2P34897 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
SHMT2P34897 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHMT2P34897 TRAV35-201ENST00000390462 330 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.19□□□□□ -1.58
SHMT2P34897 AC093655.2-201ENST00000425735 631 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.19□□□□□ -1.58
SHMT2P34897 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.19□□□□□ -1.58
SHMT2P34897 AP000797.2-201ENST00000475768 606 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 AC074386.1-201ENST00000476560 767 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 RPS21P4-201ENST00000487122 248 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 RN7SL30P-201ENST00000488416 306 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 RN7SL629P-201ENST00000489622 285 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 ENPP7P11-201ENST00000505915 627 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 SCARNA20.4-201ENST00000516969 131 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 IGLV2-28-201ENST00000520681 304 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.19□□□□□ -1.58
SHMT2P34897 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.19□□□□□ -1.58
SHMT2P34897 YWHABP2-201ENST00000540201 713 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 RPL10P14-201ENST00000565265 298 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 AC005252.1-201ENST00000604518 1063 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 AC244107.2-201ENST00000611773 76 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 AL512624.1-201ENST00000613638 469 ntBASIC5.19□□□□□ -1.58
SHMT2P34897 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.19□□□□□ -1.58
SHMT2P34897 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.19□□□□□ -1.58
SHMT2P34897 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.19□□□□□ -1.58
SHMT2P34897 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SHMT2P34897 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
SHMT2P34897 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SHMT2P34897 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHMT2P34897 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
SHMT2P34897 RARSP1-201ENST00000542842 1418 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 MIR105-1-201ENST00000385222 81 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 AC211486.3-201ENST00000412694 621 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 RPL35AP24-201ENST00000413846 330 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHMT2P34897 AC108075.1-201ENST00000424692 529 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.18□□□□□ -1.58
SHMT2P34897 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.18□□□□□ -1.58
SHMT2P34897 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.18□□□□□ -1.58
SHMT2P34897 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.18□□□□□ -1.58
SHMT2P34897 AL035090.1-201ENST00000454835 332 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 AC245028.2-201ENST00000458673 253 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 AC079168.1-201ENST00000458741 345 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 PGAM1P13-201ENST00000507497 754 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.18□□□□□ -1.58
SHMT2P34897 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.18□□□□□ -1.58
SHMT2P34897 RNU6-941P-201ENST00000516346 108 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.18□□□□□ -1.58
SHMT2P34897 CDC42P3-201ENST00000518493 633 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.18□□□□□ -1.58
SHMT2P34897 OR8G3P-201ENST00000533406 921 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.18□□□□□ -1.58
SHMT2P34897 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.18□□□□□ -1.58
SHMT2P34897 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.18□□□□□ -1.58
SHMT2P34897 AP003400.3-201ENST00000624904 346 ntBASIC5.18□□□□□ -1.58
SHMT2P34897 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SHMT2P34897 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHMT2P34897 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SHMT2P34897 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms