Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
POLR2AP24928 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
POLR2AP24928 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
POLR2AP24928 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
POLR2AP24928 MIPEPP2-201ENST00000422560 1819 ntBASIC6.32□□□□□ -1.4
POLR2AP24928 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
POLR2AP24928 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
POLR2AP24928 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
POLR2AP24928 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.32□□□□□ -1.4
POLR2AP24928 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.32□□□□□ -1.4
POLR2AP24928 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.32□□□□□ -1.4
POLR2AP24928 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
POLR2AP24928 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.31□□□□□ -1.4
POLR2AP24928 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
POLR2AP24928 AL589993.1-201ENST00000407450 2524 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 ZNF840P-201ENST00000504759 1996 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 RNU6-883P-201ENST00000384597 107 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 MIR105-1-201ENST00000385222 81 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.31□□□□□ -1.4
POLR2AP24928 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.31□□□□□ -1.4
POLR2AP24928 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.31□□□□□ -1.4
POLR2AP24928 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 KNOP1P3-201ENST00000446933 426 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 NDUFA12P1-201ENST00000455914 406 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 HMGN1P8-201ENST00000463578 288 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.31□□□□□ -1.4
POLR2AP24928 MORF4L2P1-201ENST00000503761 858 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 AC119751.5-201ENST00000514077 770 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.31□□□□□ -1.4
POLR2AP24928 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.31□□□□□ -1.4
POLR2AP24928 AC092490.3-201ENST00000545370 572 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.31□□□□□ -1.4
POLR2AP24928 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC6.31□□□□□ -1.4
POLR2AP24928 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.31□□□□□ -1.4
POLR2AP24928 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
POLR2AP24928 AC073111.2-201ENST00000605657 1075 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.31□□□□□ -1.4
POLR2AP24928 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
POLR2AP24928 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.31□□□□□ -1.4
POLR2AP24928 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
POLR2AP24928 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
POLR2AP24928 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
POLR2AP24928 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
POLR2AP24928 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.31□□□□□ -1.4
POLR2AP24928 MAPK10-371ENST00000641952 5209 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
POLR2AP24928 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
POLR2AP24928 RNA5SP428-201ENST00000365129 132 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.31□□□□□ -1.4
POLR2AP24928 AL050305.1-201ENST00000399993 1230 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 HSPA8P15-201ENST00000401676 786 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 MTCO2P31-201ENST00000402702 684 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.31□□□□□ -1.4
POLR2AP24928 AC023141.6-201ENST00000429418 337 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.31□□□□□ -1.4
POLR2AP24928 RBMY2TP-201ENST00000451162 947 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 AL121594.2-201ENST00000541658 472 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.31□□□□□ -1.4
POLR2AP24928 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
POLR2AP24928 MTND3P12-201ENST00000559068 328 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.31□□□□□ -1.4
POLR2AP24928 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.31□□□□□ -1.4
POLR2AP24928 AC006115.2-201ENST00000596823 202 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AC005776.1-201ENST00000603164 290 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 MIR6780A-201ENST00000615089 68 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 AP003789.1-201ENST00000617737 605 ntBASIC6.31□□□□□ -1.4
POLR2AP24928 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
POLR2AP24928 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.3□□□□□ -1.4
POLR2AP24928 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
POLR2AP24928 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.3□□□□□ -1.4
POLR2AP24928 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
POLR2AP24928 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.3□□□□□ -1.4
POLR2AP24928 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.3□□□□□ -1.4
POLR2AP24928 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 AL353625.1-202ENST00000366273 571 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
POLR2AP24928 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
POLR2AP24928 LUZP4P1-201ENST00000415420 344 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 C4BPAP2-201ENST00000428434 478 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 AC068287.1-201ENST00000430283 295 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 RPL7P11-201ENST00000437586 658 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 AC004854.1-201ENST00000440356 349 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 HMGN1P5-201ENST00000448591 263 ntBASIC6.3□□□□□ -1.4
POLR2AP24928 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.3□□□□□ -1.4
POLR2AP24928 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.3□□□□□ -1.4
POLR2AP24928 AC134698.5-201ENST00000519444 336 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms