Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.64□□□□□ -1.67
USF1P22415 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
USF1P22415 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 RN7SKP273-201ENST00000411392 314 ntBASIC4.64□□□□□ -1.67
USF1P22415 AL121878.1-201ENST00000418638 859 ntBASIC4.64□□□□□ -1.67
USF1P22415 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.64□□□□□ -1.67
USF1P22415 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.64□□□□□ -1.67
USF1P22415 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.64□□□□□ -1.67
USF1P22415 AC099670.2-201ENST00000435130 321 ntBASIC4.64□□□□□ -1.67
USF1P22415 AL772161.1-201ENST00000439130 476 ntBASIC4.64□□□□□ -1.67
USF1P22415 AC105399.1-202ENST00000447303 205 ntBASIC4.64□□□□□ -1.67
USF1P22415 RPL5P22-201ENST00000480199 884 ntBASIC4.64□□□□□ -1.67
USF1P22415 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.64□□□□□ -1.67
USF1P22415 MORF4L2P1-201ENST00000503761 858 ntBASIC4.64□□□□□ -1.67
USF1P22415 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.64□□□□□ -1.67
USF1P22415 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.64□□□□□ -1.67
USF1P22415 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.64□□□□□ -1.67
USF1P22415 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.64□□□□□ -1.67
USF1P22415 AC126177.5-201ENST00000549599 178 ntBASIC4.64□□□□□ -1.67
USF1P22415 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.64□□□□□ -1.67
USF1P22415 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.64□□□□□ -1.67
USF1P22415 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.64□□□□□ -1.67
USF1P22415 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.64□□□□□ -1.67
USF1P22415 AC116651.1-201ENST00000609724 556 ntBASIC4.64□□□□□ -1.67
USF1P22415 AC126915.2-201ENST00000610957 190 ntBASIC4.64□□□□□ -1.67
USF1P22415 AC015712.7-201ENST00000615211 635 ntBASIC4.64□□□□□ -1.67
USF1P22415 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.64□□□□□ -1.67
USF1P22415 AC138965.3-201ENST00000623875 498 ntBASIC4.64□□□□□ -1.67
USF1P22415 AC009950.2-201ENST00000636548 183 ntBASIC4.64□□□□□ -1.67
USF1P22415 AC074101.1-201ENST00000637861 241 ntBASIC4.64□□□□□ -1.67
USF1P22415 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.64□□□□□ -1.67
USF1P22415 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.64□□□□□ -1.67
USF1P22415 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
USF1P22415 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 AL360270.2-201ENST00000562952 5985 ntBASIC4.63□□□□□ -1.67
USF1P22415 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USF1P22415 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 RNA5SP335-201ENST00000363817 110 ntBASIC4.63□□□□□ -1.67
USF1P22415 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 RNA5SP187-201ENST00000384400 119 ntBASIC4.63□□□□□ -1.67
USF1P22415 MIR765-201ENST00000390226 114 ntBASIC4.63□□□□□ -1.67
USF1P22415 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USF1P22415 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
USF1P22415 RN7SKP125-201ENST00000410481 302 ntBASIC4.63□□□□□ -1.67
USF1P22415 AL356968.2-201ENST00000412769 1257 ntBASIC4.63□□□□□ -1.67
USF1P22415 MTND4LP21-201ENST00000415303 295 ntBASIC4.63□□□□□ -1.67
USF1P22415 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.63□□□□□ -1.67
USF1P22415 AC138761.5-201ENST00000433967 325 ntBASIC4.63□□□□□ -1.67
USF1P22415 OR52B5P-201ENST00000435337 951 ntBASIC4.63□□□□□ -1.67
USF1P22415 MTND2P40-201ENST00000436718 841 ntBASIC4.63□□□□□ -1.67
USF1P22415 RPL12P3-201ENST00000440080 396 ntBASIC4.63□□□□□ -1.67
USF1P22415 RPS11P7-201ENST00000442125 465 ntBASIC4.63□□□□□ -1.67
USF1P22415 OTX2P1-201ENST00000450956 354 ntBASIC4.63□□□□□ -1.67
USF1P22415 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.63□□□□□ -1.67
USF1P22415 RN7SL222P-201ENST00000476452 299 ntBASIC4.63□□□□□ -1.67
USF1P22415 RPS18P6-201ENST00000476880 458 ntBASIC4.63□□□□□ -1.67
USF1P22415 RPL7AP6-201ENST00000477943 801 ntBASIC4.63□□□□□ -1.67
USF1P22415 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.63□□□□□ -1.67
USF1P22415 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.63□□□□□ -1.67
USF1P22415 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.63□□□□□ -1.67
USF1P22415 GAPDHP62-201ENST00000515313 990 ntBASIC4.63□□□□□ -1.67
USF1P22415 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.63□□□□□ -1.67
USF1P22415 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.63□□□□□ -1.67
USF1P22415 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.63□□□□□ -1.67
USF1P22415 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.63□□□□□ -1.67
USF1P22415 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.63□□□□□ -1.67
USF1P22415 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.63□□□□□ -1.67
USF1P22415 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.63□□□□□ -1.67
USF1P22415 BLZF2P-201ENST00000553776 1130 ntBASIC4.63□□□□□ -1.67
USF1P22415 AC027216.1-201ENST00000577726 685 ntBASIC4.63□□□□□ -1.67
USF1P22415 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.63□□□□□ -1.67
USF1P22415 AC009163.6-201ENST00000612367 342 ntBASIC4.63□□□□□ -1.67
USF1P22415 MIR6798-201ENST00000612887 67 ntBASIC4.63□□□□□ -1.67
USF1P22415 AC025574.2-201ENST00000615621 514 ntBASIC4.63□□□□□ -1.67
USF1P22415 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.63□□□□□ -1.67
USF1P22415 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.63□□□□□ -1.67
USF1P22415 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.63□□□□□ -1.67
USF1P22415 OR52B5P-202ENST00000641118 1110 ntBASIC4.63□□□□□ -1.67
USF1P22415 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 HSPD1P7-201ENST00000447985 1686 ntBASIC4.63□□□□□ -1.67
USF1P22415 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms