Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.65□□□□□ -1.5
CAPN3P20807 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.65□□□□□ -1.5
CAPN3P20807 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CAPN3P20807 AL121594.2-201ENST00000541658 472 ntBASIC5.65□□□□□ -1.5
CAPN3P20807 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.65□□□□□ -1.5
CAPN3P20807 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.65□□□□□ -1.5
CAPN3P20807 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.65□□□□□ -1.5
CAPN3P20807 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.65□□□□□ -1.5
CAPN3P20807 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.65□□□□□ -1.5
CAPN3P20807 VN1R84P-201ENST00000593697 235 ntBASIC5.65□□□□□ -1.5
CAPN3P20807 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.65□□□□□ -1.5
CAPN3P20807 AL513327.3-201ENST00000602618 469 ntBASIC5.65□□□□□ -1.5
CAPN3P20807 AC090525.3-201ENST00000605601 189 ntBASIC5.65□□□□□ -1.5
CAPN3P20807 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.65□□□□□ -1.5
CAPN3P20807 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.65□□□□□ -1.5
CAPN3P20807 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.65□□□□□ -1.5
CAPN3P20807 AC245389.2-201ENST00000616023 576 ntBASIC5.65□□□□□ -1.5
CAPN3P20807 AC126175.1-201ENST00000617041 758 ntBASIC5.65□□□□□ -1.5
CAPN3P20807 AC242843.1-201ENST00000618702 573 ntBASIC5.65□□□□□ -1.5
CAPN3P20807 AC010435.1-201ENST00000623353 1177 ntBASIC5.65□□□□□ -1.5
CAPN3P20807 AL357562.1-201ENST00000624911 609 ntBASIC5.65□□□□□ -1.5
CAPN3P20807 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.65□□□□□ -1.5
CAPN3P20807 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.65□□□□□ -1.5
CAPN3P20807 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.65□□□□□ -1.51
CAPN3P20807 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CAPN3P20807 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CAPN3P20807 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CAPN3P20807 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CAPN3P20807 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CAPN3P20807 HSPD1P11-201ENST00000508643 1702 ntBASIC5.65□□□□□ -1.51
CAPN3P20807 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC093671.1-201ENST00000624981 2929 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CAPN3P20807 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CAPN3P20807 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.64□□□□□ -1.51
CAPN3P20807 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CAPN3P20807 CCT8P1-201ENST00000413611 1657 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CAPN3P20807 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CAPN3P20807 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CAPN3P20807 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.64□□□□□ -1.51
CAPN3P20807 SUGT1P2-201ENST00000379452 992 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 RNU6-178P-201ENST00000384631 104 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 MIR143-201ENST00000385300 106 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 USP9YP19-201ENST00000412165 485 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC019205.1-201ENST00000421830 730 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 AC099677.3-201ENST00000427081 395 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CAPN3P20807 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC096775.1-201ENST00000437724 448 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 ELOCP3-201ENST00000439303 348 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 RPS23P9-201ENST00000448848 438 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CAPN3P20807 AC004129.2-201ENST00000457229 287 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 RPL23AP12-201ENST00000467573 473 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 RN7SL273P-201ENST00000481561 299 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC097486.1-201ENST00000515331 210 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 MIR2117-201ENST00000516780 80 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 HAUS1P3-201ENST00000523909 662 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 OR4A17P-201ENST00000526032 904 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.64□□□□□ -1.51
CAPN3P20807 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC079905.1-201ENST00000549280 475 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 AL136520.1-202ENST00000555494 763 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 NPM1P47-201ENST00000560843 856 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.64□□□□□ -1.51
CAPN3P20807 AL163952.1-202ENST00000569625 600 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 AP005136.2-201ENST00000583253 1049 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 RPL21P136-201ENST00000605378 396 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 RPSAP75-201ENST00000605848 301 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC092681.3-201ENST00000609463 678 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 AP001033.2-201ENST00000609701 1003 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 AC022467.1-201ENST00000614738 749 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 AC015712.7-201ENST00000615211 635 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 RNA5SP439-201ENST00000617595 124 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.64□□□□□ -1.51
CAPN3P20807 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CAPN3P20807 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CAPN3P20807 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.64□□□□□ -1.51
CAPN3P20807 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CAPN3P20807 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CAPN3P20807 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.64□□□□□ -1.51
CAPN3P20807 TCP1P3-201ENST00000414406 1498 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 AL121839.2-201ENST00000565058 6943 ntBASIC5.64□□□□□ -1.51
CAPN3P20807 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CAPN3P20807 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.64□□□□□ -1.51
CAPN3P20807 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CAPN3P20807 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CAPN3P20807 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms