Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.74□□□□□ -1.49
VTNP04004 AC079298.1-201ENST00000625026 1619 ntBASIC5.74□□□□□ -1.49
VTNP04004 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.74□□□□□ -1.49
VTNP04004 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.73□□□□□ -1.49
VTNP04004 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
VTNP04004 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VTNP04004 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.73□□□□□ -1.49
VTNP04004 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VTNP04004 SNORA51.8-201ENST00000384234 132 ntBASIC5.73□□□□□ -1.49
VTNP04004 OR8V1P-201ENST00000395193 873 ntBASIC5.73□□□□□ -1.49
VTNP04004 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.73□□□□□ -1.49
VTNP04004 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 RHOT1P3-201ENST00000436571 331 ntBASIC5.73□□□□□ -1.49
VTNP04004 NOP56P2-201ENST00000447491 769 ntBASIC5.73□□□□□ -1.49
VTNP04004 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 AC108161.1-201ENST00000461060 402 ntBASIC5.73□□□□□ -1.49
VTNP04004 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.73□□□□□ -1.49
VTNP04004 RPL37AP8-201ENST00000494116 276 ntBASIC5.73□□□□□ -1.49
VTNP04004 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.73□□□□□ -1.49
VTNP04004 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 AP001922.4-201ENST00000526967 290 ntBASIC5.73□□□□□ -1.49
VTNP04004 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.73□□□□□ -1.49
VTNP04004 OR5D15P-201ENST00000531671 942 ntBASIC5.73□□□□□ -1.49
VTNP04004 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VTNP04004 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.73□□□□□ -1.49
VTNP04004 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.73□□□□□ -1.49
VTNP04004 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.73□□□□□ -1.49
VTNP04004 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.73□□□□□ -1.49
VTNP04004 AL049539.1-201ENST00000611964 459 ntBASIC5.73□□□□□ -1.49
VTNP04004 AP001784.1-201ENST00000624107 428 ntBASIC5.73□□□□□ -1.49
VTNP04004 AL353662.3-201ENST00000625131 237 ntBASIC5.73□□□□□ -1.49
VTNP04004 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 THAP12P4-201ENST00000528321 2266 ntBASIC5.73□□□□□ -1.49
VTNP04004 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.73□□□□□ -1.49
VTNP04004 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.73□□□□□ -1.49
VTNP04004 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.73□□□□□ -1.49
VTNP04004 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VTNP04004 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.73□□□□□ -1.49
VTNP04004 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
VTNP04004 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VTNP04004 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.72□□□□□ -1.49
VTNP04004 RBMY2KP-201ENST00000418221 992 ntBASIC5.72□□□□□ -1.49
VTNP04004 AC124944.2-201ENST00000429866 1242 ntBASIC5.72□□□□□ -1.49
VTNP04004 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.72□□□□□ -1.49
VTNP04004 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 Z80107.2-201ENST00000445127 392 ntBASIC5.72□□□□□ -1.49
VTNP04004 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.72□□□□□ -1.49
VTNP04004 HIGD1AP8-201ENST00000453927 274 ntBASIC5.72□□□□□ -1.49
VTNP04004 RPL5P16-201ENST00000471467 790 ntBASIC5.72□□□□□ -1.49
VTNP04004 AC090589.1-201ENST00000473109 362 ntBASIC5.72□□□□□ -1.49
VTNP04004 AP000797.2-201ENST00000475768 606 ntBASIC5.72□□□□□ -1.49
VTNP04004 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.72□□□□□ -1.49
VTNP04004 RPL7P41-201ENST00000485823 957 ntBASIC5.72□□□□□ -1.49
VTNP04004 HMGN2P25-201ENST00000486956 268 ntBASIC5.72□□□□□ -1.49
VTNP04004 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.72□□□□□ -1.49
VTNP04004 AC008676.3-201ENST00000521237 435 ntBASIC5.72□□□□□ -1.49
VTNP04004 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.72□□□□□ -1.49
VTNP04004 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.72□□□□□ -1.49
VTNP04004 EIF3FP1-201ENST00000613970 806 ntBASIC5.72□□□□□ -1.49
VTNP04004 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.72□□□□□ -1.49
VTNP04004 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.72□□□□□ -1.49
VTNP04004 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.72□□□□□ -1.49
VTNP04004 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.72□□□□□ -1.49
VTNP04004 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VTNP04004 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
VTNP04004 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VTNP04004 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.72□□□□□ -1.49
VTNP04004 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VTNP04004 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
VTNP04004 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.71□□□□□ -1.49
VTNP04004 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms