Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.08□□□□□ -1.44
COL2A1P02458 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.08□□□□□ -1.44
COL2A1P02458 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.08□□□□□ -1.44
COL2A1P02458 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.08□□□□□ -1.44
COL2A1P02458 IGBP1P5-201ENST00000507524 1000 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
COL2A1P02458 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.08□□□□□ -1.44
COL2A1P02458 AC006213.4-201ENST00000616184 634 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 AC068831.8-201ENST00000620171 435 ntBASIC6.08□□□□□ -1.44
COL2A1P02458 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.08□□□□□ -1.44
COL2A1P02458 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.08□□□□□ -1.44
COL2A1P02458 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
COL2A1P02458 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
COL2A1P02458 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.07□□□□□ -1.44
COL2A1P02458 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL2A1P02458 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL2A1P02458 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.07□□□□□ -1.44
COL2A1P02458 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL2A1P02458 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.07□□□□□ -1.44
COL2A1P02458 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
COL2A1P02458 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.07□□□□□ -1.44
COL2A1P02458 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL2A1P02458 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL2A1P02458 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL2A1P02458 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL2A1P02458 SNORA66-201ENST00000384792 133 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 SNORA48.4-201ENST00000391089 134 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 AL133482.1-201ENST00000415988 498 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 CHEK2P3-201ENST00000416118 248 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.07□□□□□ -1.44
COL2A1P02458 HSPD1P12-201ENST00000429127 1069 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 BX276092.6-201ENST00000430476 250 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.07□□□□□ -1.44
COL2A1P02458 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.07□□□□□ -1.44
COL2A1P02458 AL513533.1-201ENST00000453728 415 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.07□□□□□ -1.44
COL2A1P02458 BX276092.8-201ENST00000455722 250 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 RN7SL189P-201ENST00000468631 289 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 SUMO2P19-201ENST00000518920 295 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC6.07□□□□□ -1.44
COL2A1P02458 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.07□□□□□ -1.44
COL2A1P02458 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.07□□□□□ -1.44
COL2A1P02458 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL2A1P02458 MIR5096-201ENST00000583713 70 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 PRELID3BP3-201ENST00000584963 545 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 AC105254.2-201ENST00000603636 436 ntBASIC6.07□□□□□ -1.44
COL2A1P02458 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL2A1P02458 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL2A1P02458 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL2A1P02458 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL2A1P02458 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
COL2A1P02458 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL2A1P02458 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.06□□□□□ -1.44
COL2A1P02458 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL2A1P02458 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL2A1P02458 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.06□□□□□ -1.44
COL2A1P02458 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL2A1P02458 BX323845.1-201ENST00000432417 179 ntBASIC6.06□□□□□ -1.44
COL2A1P02458 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL2A1P02458 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.06□□□□□ -1.44
COL2A1P02458 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.06□□□□□ -1.44
COL2A1P02458 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC6.06□□□□□ -1.44
COL2A1P02458 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.06□□□□□ -1.44
COL2A1P02458 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.06□□□□□ -1.44
COL2A1P02458 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.06□□□□□ -1.44
COL2A1P02458 AC130364.2-201ENST00000528639 604 ntBASIC6.06□□□□□ -1.44
COL2A1P02458 NMNAT1P1-201ENST00000554095 876 ntBASIC6.06□□□□□ -1.44
COL2A1P02458 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.06□□□□□ -1.44
COL2A1P02458 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COL2A1P02458 AC020656.2-201ENST00000613291 5309 ntBASIC6.06□□□□□ -1.44
COL2A1P02458 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL2A1P02458 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.06□□□□□ -1.44
COL2A1P02458 AL137141.1-201ENST00000624622 4836 ntBASIC6.06□□□□□ -1.44
COL2A1P02458 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL2A1P02458 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL2A1P02458 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL2A1P02458 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL2A1P02458 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL2A1P02458 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.05□□□□□ -1.44
COL2A1P02458 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.05□□□□□ -1.44
COL2A1P02458 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.05□□□□□ -1.44
COL2A1P02458 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL2A1P02458 RNU6-398P-201ENST00000384143 109 ntBASIC6.05□□□□□ -1.44
COL2A1P02458 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL2A1P02458 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.05□□□□□ -1.44
COL2A1P02458 RPL7AP49-201ENST00000429522 581 ntBASIC6.05□□□□□ -1.44
COL2A1P02458 AL591438.1-201ENST00000433508 581 ntBASIC6.05□□□□□ -1.44
COL2A1P02458 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.05□□□□□ -1.44
COL2A1P02458 AC023271.1-201ENST00000445936 1090 ntBASIC6.05□□□□□ -1.44
COL2A1P02458 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.05□□□□□ -1.44
COL2A1P02458 BTF3P13-201ENST00000513224 490 ntBASIC6.05□□□□□ -1.44
COL2A1P02458 BGLT3-201ENST00000564523 994 ntBASIC6.05□□□□□ -1.44
COL2A1P02458 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms