Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmg20bQ9Z104 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Gm10252-201ENSMUST00000209541 832 ntBASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hmg20bQ9Z104 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmg20bQ9Z104 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Actl10-202ENSMUST00000226583 1501 ntBASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmg20bQ9Z104 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Gm43799-201ENSMUST00000201845 579 ntBASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Hmg20bQ9Z104 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Gm7889-201ENSMUST00000185591 958 ntBASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hmg20bQ9Z104 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hmg20bQ9Z104 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hmg20bQ9Z104 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms