Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 Tgds-204ENSMUST00000228543 1594 ntBASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col13a1Q9R1N9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Gm12895-201ENSMUST00000122214 226 ntBASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col13a1Q9R1N9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Il3ra-202ENSMUST00000223589 738 ntBASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col13a1Q9R1N9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Gm13401-201ENSMUST00000117074 291 ntBASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col13a1Q9R1N9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Gm15794-201ENSMUST00000120182 631 ntBASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col13a1Q9R1N9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms