Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ube4bQ9ES00 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ube4bQ9ES00 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ube4bQ9ES00 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ube4bQ9ES00 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ube4bQ9ES00 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ube4bQ9ES00 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ube4bQ9ES00 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ube4bQ9ES00 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ube4bQ9ES00 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms