Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Mir770-201ENSMUST00000103252 94 ntBASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Gm27742-201ENSMUST00000184667 60 ntBASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Idnk-204ENSMUST00000226010 1898 ntBASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC9.02□□□□□ -0.97
Sec61bQ9CQS8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Gm11860-201ENSMUST00000122346 1010 ntBASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Gm27357-201ENSMUST00000183754 135 ntBASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Sec61bQ9CQS8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC9□□□□□ -0.97
Sec61bQ9CQS8 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Gm28033-201ENSMUST00000184224 96 ntBASIC9□□□□□ -0.97
Sec61bQ9CQS8 Gm18558-201ENSMUST00000186253 1214 ntBASIC9□□□□□ -0.97
Sec61bQ9CQS8 Otx2os1-206ENSMUST00000228153 787 ntBASIC9□□□□□ -0.97
Sec61bQ9CQS8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9□□□□□ -0.97
Sec61bQ9CQS8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9□□□□□ -0.97
Sec61bQ9CQS8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Sec61bQ9CQS8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms