Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Mir770-201ENSMUST00000103252 94 ntBASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Gm13186-201ENSMUST00000118031 316 ntBASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Gm11336-201ENSMUST00000118168 334 ntBASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Gm6190-201ENSMUST00000220683 1374 ntBASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Lsm7Q9CQQ8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Lsm7Q9CQQ8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Gm18115-201ENSMUST00000221209 621 ntBASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Lsm7Q9CQQ8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Lsm7Q9CQQ8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Phf7-203ENSMUST00000226565 1971 ntBASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Lsm7Q9CQQ8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms