Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm44357-201ENSMUST00000195897 142 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm19658-201ENSMUST00000196231 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44367-201ENSMUST00000196836 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44350-201ENSMUST00000197197 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44390-201ENSMUST00000197533 144 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44313-201ENSMUST00000198018 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44486-201ENSMUST00000198508 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44454-201ENSMUST00000198541 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44314-201ENSMUST00000199263 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44394-201ENSMUST00000199558 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44484-201ENSMUST00000199873 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44466-201ENSMUST00000200264 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm44359-201ENSMUST00000200671 138 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Gm10060-201ENSMUST00000212002 111 ntBASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nkx6-1Q99MA9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Gm12350-201ENSMUST00000121208 462 ntBASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nkx6-1Q99MA9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx6-1Q99MA9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Nkx6-1Q99MA9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Gm15165-201ENSMUST00000118140 502 ntBASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Gm5264-201ENSMUST00000190584 848 ntBASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-1Q99MA9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Gm27702-201ENSMUST00000184512 56 ntBASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.69■□□□□ 0.1
Nkx6-1Q99MA9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-1Q99MA9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms