Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb1Q91Y08 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Mir7071-201ENSMUST00000184847 69 ntBASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb1Q91Y08 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb1Q91Y08 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb1Q91Y08 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Gm11539-201ENSMUST00000119837 557 ntBASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Gm13436-201ENSMUST00000120418 567 ntBASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Gm2274-201ENSMUST00000184539 609 ntBASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb1Q91Y08 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb1Q91Y08 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms