Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40bQ8VHP8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Gm10849-201ENSMUST00000100397 618 ntBASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Gm4968-201ENSMUST00000071458 858 ntBASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rab40bQ8VHP8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rab40bQ8VHP8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.12■□□□□ 0.01
Rab40bQ8VHP8 Gm2559-201ENSMUST00000201323 363 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms