Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Gm38027-201ENSMUST00000192315 235 ntBASIC16.84■□□□□ 0.29
Vps39Q8R5L3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.84■□□□□ 0.29
Vps39Q8R5L3 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps39Q8R5L3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Vps39Q8R5L3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Vps39Q8R5L3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.83■□□□□ 0.29
Vps39Q8R5L3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Mir1199-201ENSMUST00000117015 119 ntBASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Gm7638-201ENSMUST00000121348 967 ntBASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Gm8520-201ENSMUST00000186517 868 ntBASIC16.83■□□□□ 0.28
Vps39Q8R5L3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps39Q8R5L3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps39Q8R5L3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Il3ra-202ENSMUST00000223589 738 ntBASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Timm23-208ENSMUST00000226683 750 ntBASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps39Q8R5L3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps39Q8R5L3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.79■□□□□ 0.28
Vps39Q8R5L3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms