Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Gm7370-201ENSMUST00000219471 767 ntBASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Top1mtQ8R4U6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top1mtQ8R4U6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Gm13559-201ENSMUST00000120476 863 ntBASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Gm2274-201ENSMUST00000184539 609 ntBASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top1mtQ8R4U6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Top1mtQ8R4U6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Top1mtQ8R4U6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.08■□□□□ 0.8
Top1mtQ8R4U6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Haglr-201ENSMUST00000100000 2085 ntBASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top1mtQ8R4U6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms