Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slf1Q8R3P9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Gm13148-201ENSMUST00000118892 745 ntBASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slf1Q8R3P9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Slf1Q8R3P9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slf1Q8R3P9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slf1Q8R3P9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slf1Q8R3P9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slf1Q8R3P9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.02■□□□□ 0.32
Slf1Q8R3P9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.02■□□□□ 0.32
Slf1Q8R3P9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slf1Q8R3P9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slf1Q8R3P9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slf1Q8R3P9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slf1Q8R3P9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slf1Q8R3P9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slf1Q8R3P9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slf1Q8R3P9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.01■□□□□ 0.31
Slf1Q8R3P9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
Slf1Q8R3P9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Slf1Q8R3P9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17■□□□□ 0.31
Slf1Q8R3P9 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Mir8112-201ENSMUST00000184382 131 ntBASIC17■□□□□ 0.31
Slf1Q8R3P9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17■□□□□ 0.31
Slf1Q8R3P9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17■□□□□ 0.31
Slf1Q8R3P9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17■□□□□ 0.31
Slf1Q8R3P9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Gm12933-201ENSMUST00000120203 872 ntBASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Slf1Q8R3P9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms