Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.89■□□□□ 0.13
Clrn1Q8K445 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Clrn1Q8K445 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clrn1Q8K445 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Clrn1Q8K445 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clrn1Q8K445 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Clrn1Q8K445 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Clrn1Q8K445 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Clrn1Q8K445 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.89■□□□□ 0.13
Clrn1Q8K445 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.88■□□□□ 0.13
Clrn1Q8K445 Gm11539-201ENSMUST00000119837 557 ntBASIC15.88■□□□□ 0.13
Clrn1Q8K445 Gm13436-201ENSMUST00000120418 567 ntBASIC15.88■□□□□ 0.13
Clrn1Q8K445 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Clrn1Q8K445 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.87■□□□□ 0.13
Clrn1Q8K445 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.87■□□□□ 0.13
Clrn1Q8K445 Gm27000-201ENSMUST00000182943 842 ntBASIC15.87■□□□□ 0.13
Clrn1Q8K445 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.87■□□□□ 0.13
Clrn1Q8K445 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Clrn1Q8K445 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.87■□□□□ 0.13
Clrn1Q8K445 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Gm15565-201ENSMUST00000118890 427 ntBASIC15.86■□□□□ 0.13
Clrn1Q8K445 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Clrn1Q8K445 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Clrn1Q8K445 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Clrn1Q8K445 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Gm2274-201ENSMUST00000184539 609 ntBASIC15.85■□□□□ 0.13
Clrn1Q8K445 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.85■□□□□ 0.13
Clrn1Q8K445 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Clrn1Q8K445 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.84■□□□□ 0.13
Clrn1Q8K445 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms