Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Gm9870-201ENSMUST00000063874 645 ntBASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hist3h2bbQ8CGP0 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.83□□□□□ -0.35
Hist3h2bbQ8CGP0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Hist3h2bbQ8CGP0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hist3h2bbQ8CGP0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Gm11687-201ENSMUST00000118911 886 ntBASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hist3h2bbQ8CGP0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Hist3h2bbQ8CGP0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hist3h2bbQ8CGP0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms