Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim9Q8C7M3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim9Q8C7M3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Gm13186-201ENSMUST00000118031 316 ntBASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Gm16061-201ENSMUST00000122167 857 ntBASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim9Q8C7M3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Gm43799-201ENSMUST00000201845 579 ntBASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim9Q8C7M3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trim9Q8C7M3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Trim9Q8C7M3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim9Q8C7M3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trim9Q8C7M3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim9Q8C7M3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim9Q8C7M3 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Gm15565-201ENSMUST00000118890 427 ntBASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim9Q8C7M3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms