Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Haglr-201ENSMUST00000100000 2085 ntBASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Usp44Q8C2S0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Mir7071-201ENSMUST00000184847 69 ntBASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Usp44Q8C2S0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Gm11336-201ENSMUST00000118168 334 ntBASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Usp44Q8C2S0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Usp44Q8C2S0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Gm27389-201ENSMUST00000183622 195 ntBASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Gm18101-201ENSMUST00000215769 548 ntBASIC19.65■□□□□ 0.74
Usp44Q8C2S0 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp44Q8C2S0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
Usp44Q8C2S0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp44Q8C2S0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp44Q8C2S0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Usp44Q8C2S0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp44Q8C2S0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Gm18421-201ENSMUST00000204122 625 ntBASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp44Q8C2S0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms