Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Gm10231-201ENSMUST00000181584 441 ntBASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Gm10175-202ENSMUST00000208752 441 ntBASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Gm18959-201ENSMUST00000208954 655 ntBASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm4Q8BKA3 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.58□□□□□ -0.07
Srrm4Q8BKA3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Srrm4Q8BKA3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Srrm4Q8BKA3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Srrm4Q8BKA3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Srrm4Q8BKA3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Gm45058-201ENSMUST00000205810 766 ntBASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm4Q8BKA3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.57□□□□□ -0.08
Srrm4Q8BKA3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Mir5130-201ENSMUST00000175160 84 ntBASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Srrm4Q8BKA3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srrm4Q8BKA3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Srrm4Q8BKA3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.55□□□□□ -0.08
Srrm4Q8BKA3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srrm4Q8BKA3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srrm4Q8BKA3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srrm4Q8BKA3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Srrm4Q8BKA3 Gm16061-201ENSMUST00000122167 857 ntBASIC14.55□□□□□ -0.08
Srrm4Q8BKA3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 482.7 ms