Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim6Q8BGE7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim6Q8BGE7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trim6Q8BGE7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Gm6576-201ENSMUST00000169678 883 ntBASIC17.89■□□□□ 0.45
Trim6Q8BGE7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim6Q8BGE7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim6Q8BGE7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim6Q8BGE7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Gm12933-201ENSMUST00000120203 872 ntBASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim6Q8BGE7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms