Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim65Q8BFW4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim65Q8BFW4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Trim65Q8BFW4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim65Q8BFW4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim65Q8BFW4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.02■□□□□ 0.48
Trim65Q8BFW4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim65Q8BFW4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim65Q8BFW4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim65Q8BFW4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim65Q8BFW4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.02■□□□□ 0.48
Trim65Q8BFW4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim65Q8BFW4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim65Q8BFW4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Trim65Q8BFW4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim65Q8BFW4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim65Q8BFW4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trim65Q8BFW4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim65Q8BFW4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim65Q8BFW4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trim65Q8BFW4 Gm26596-201ENSMUST00000180464 2655 ntBASIC18■□□□□ 0.47
Trim65Q8BFW4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trim65Q8BFW4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18■□□□□ 0.47
Trim65Q8BFW4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18■□□□□ 0.47
Trim65Q8BFW4 Gm13559-201ENSMUST00000120476 863 ntBASIC18■□□□□ 0.47
Trim65Q8BFW4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18■□□□□ 0.47
Trim65Q8BFW4 Gm7370-201ENSMUST00000219471 767 ntBASIC18■□□□□ 0.47
Trim65Q8BFW4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim65Q8BFW4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Gm2274-201ENSMUST00000184539 609 ntBASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim65Q8BFW4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Gm15565-201ENSMUST00000118890 427 ntBASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim65Q8BFW4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms