Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.39■□□□□ 0.37
Rtl3Q6P1Y1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Gm10566-201ENSMUST00000086739 996 ntBASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rtl3Q6P1Y1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtl3Q6P1Y1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtl3Q6P1Y1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Gm27741-201ENSMUST00000185060 237 ntBASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtl3Q6P1Y1 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Gm27389-201ENSMUST00000183622 195 ntBASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Actl10-202ENSMUST00000226583 1501 ntBASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rtl3Q6P1Y1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtl3Q6P1Y1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms