Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.17■□□□□ 0.18
Rai1Q61818 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Rai1Q61818 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Gm25745-201ENSMUST00000174945 133 ntBASIC16.17■□□□□ 0.18
Rai1Q61818 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Rai1Q61818 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rai1Q61818 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rai1Q61818 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.16■□□□□ 0.18
Rai1Q61818 Gm1401-201ENSMUST00000122048 772 ntBASIC16.16■□□□□ 0.18
Rai1Q61818 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.16■□□□□ 0.18
Rai1Q61818 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.16■□□□□ 0.18
Rai1Q61818 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.16■□□□□ 0.18
Rai1Q61818 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.16■□□□□ 0.18
Rai1Q61818 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.16■□□□□ 0.18
Rai1Q61818 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.16■□□□□ 0.18
Rai1Q61818 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.16■□□□□ 0.18
Rai1Q61818 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rai1Q61818 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.16■□□□□ 0.18
Rai1Q61818 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Gm7230-201ENSMUST00000173026 815 ntBASIC16.16■□□□□ 0.18
Rai1Q61818 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.16■□□□□ 0.18
Rai1Q61818 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rai1Q61818 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rai1Q61818 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Rai1Q61818 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.15■□□□□ 0.18
Rai1Q61818 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.15■□□□□ 0.18
Rai1Q61818 Gm25990-201ENSMUST00000102440 86 ntBASIC16.15■□□□□ 0.18
Rai1Q61818 Gm7862-201ENSMUST00000121461 292 ntBASIC16.15■□□□□ 0.18
Rai1Q61818 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rai1Q61818 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Rai1Q61818 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rai1Q61818 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rai1Q61818 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Rai1Q61818 Gm11779-201ENSMUST00000118541 368 ntBASIC16.14■□□□□ 0.17
Rai1Q61818 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Rai1Q61818 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Rai1Q61818 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rai1Q61818 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rai1Q61818 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rai1Q61818 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rai1Q61818 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rai1Q61818 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.13■□□□□ 0.17
Rai1Q61818 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.13■□□□□ 0.17
Rai1Q61818 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rai1Q61818 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rai1Q61818 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rai1Q61818 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rai1Q61818 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rai1Q61818 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rai1Q61818 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rai1Q61818 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.12■□□□□ 0.17
Rai1Q61818 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms