Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox17Q61473 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox17Q61473 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Sox17Q61473 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox17Q61473 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox17Q61473 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Sox17Q61473 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sox17Q61473 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.82■□□□□ 0.12
Sox17Q61473 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sox17Q61473 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
Sox17Q61473 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sox17Q61473 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox17Q61473 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.82■□□□□ 0.12
Sox17Q61473 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.82■□□□□ 0.12
Sox17Q61473 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.82■□□□□ 0.12
Sox17Q61473 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.82■□□□□ 0.12
Sox17Q61473 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Sox17Q61473 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sox17Q61473 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.81■□□□□ 0.12
Sox17Q61473 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Sox17Q61473 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.81■□□□□ 0.12
Sox17Q61473 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Sox17Q61473 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.81■□□□□ 0.12
Sox17Q61473 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sox17Q61473 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sox17Q61473 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.8■□□□□ 0.12
Sox17Q61473 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sox17Q61473 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.8■□□□□ 0.12
Sox17Q61473 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sox17Q61473 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.8■□□□□ 0.12
Sox17Q61473 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sox17Q61473 Gm6576-201ENSMUST00000169678 883 ntBASIC15.8■□□□□ 0.12
Sox17Q61473 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.8■□□□□ 0.12
Sox17Q61473 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.8■□□□□ 0.12
Sox17Q61473 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sox17Q61473 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sox17Q61473 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sox17Q61473 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.79■□□□□ 0.12
Sox17Q61473 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.79■□□□□ 0.12
Sox17Q61473 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.79■□□□□ 0.12
Sox17Q61473 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.79■□□□□ 0.12
Sox17Q61473 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sox17Q61473 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sox17Q61473 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Sox17Q61473 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.78■□□□□ 0.12
Sox17Q61473 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sox17Q61473 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms